Cluster: CGMR066211_CGC15
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR066211
- CGC Family ID: CGCFAM_00191
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_138354 | k141_138354_17 | 21575 | 22726 | - | CE9 |
| STP | k141_138354 | k141_138354_18 | 22742 | 23899 | - | SIS | SIS |
| TF | k141_138354 | k141_138354_19 | 23918 | 24643 | - | GntR |
| TC | k141_138354 | k141_138354_20 | 24946 | 25974 | - | 4.A.6.1.4 |
| TC | k141_138354 | k141_138354_21 | 25964 | 26776 | - | 4.A.6.1.4 |
| TC | k141_138354 | k141_138354_22 | 26794 | 27273 | - | 4.A.6.1.4 |
| pfam | k141_138354 | k141_138354_23 | 27289 | 27567 | - | YajC |
| TC | k141_138354 | k141_138354_24 | 27569 | 28000 | - | 4.A.6.1.8 |
Gene ID: k141_138354_17
Type: CAZyme
Location: 21575 - 22726 (-)
Type: CAZyme
Location: 21575 - 22726 (-)
Gene ID: k141_138354_18
Type: STP
Location: 22742 - 23899 (-)
Type: STP
Location: 22742 - 23899 (-)
Gene ID: k141_138354_19
Type: TF
Location: 23918 - 24643 (-)
Type: TF
Location: 23918 - 24643 (-)
Gene ID: k141_138354_20
Type: TC
Location: 24946 - 25974 (-)
Type: TC
Location: 24946 - 25974 (-)
Gene ID: k141_138354_21
Type: TC
Location: 25964 - 26776 (-)
Type: TC
Location: 25964 - 26776 (-)
Gene ID: k141_138354_22
Type: TC
Location: 26794 - 27273 (-)
Type: TC
Location: 26794 - 27273 (-)
Gene ID: k141_138354_23
Type: pfam
Location: 27289 - 27567 (-)
Type: pfam
Location: 27289 - 27567 (-)
Gene ID: k141_138354_24
Type: TC
Location: 27569 - 28000 (-)
Type: TC
Location: 27569 - 28000 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Vagococcaceae
Genus
Vagococcus
Species
Vagococcus silagei
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.