Cluster: CGMR066211_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR066211
- CGC Family ID: CGCFAM_01400
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_83135 | k141_83135_1 | 217 | 1035 | - | 4.A.6.1.13 |
| TC | k141_83135 | k141_83135_2 | 1022 | 1822 | - | 4.A.6.1.13 |
| TC | k141_83135 | k141_83135_3 | 1847 | 2761 | - | 4.A.6.1.13 |
| TF | k141_83135 | k141_83135_4 | 2983 | 3690 | + | GntR |
| CAZyme | k141_83135 | k141_83135_5 | 3712 | 5496 | - | GH35 |
| CAZyme | k141_83135 | k141_83135_6 | 5514 | 6677 | - | GH88 |
Gene ID: k141_83135_1
Type: TC
Location: 217 - 1035 (-)
Type: TC
Location: 217 - 1035 (-)
Gene ID: k141_83135_2
Type: TC
Location: 1022 - 1822 (-)
Type: TC
Location: 1022 - 1822 (-)
Gene ID: k141_83135_3
Type: TC
Location: 1847 - 2761 (-)
Type: TC
Location: 1847 - 2761 (-)
Gene ID: k141_83135_4
Type: TF
Location: 2983 - 3690 (+)
Type: TF
Location: 2983 - 3690 (+)
Gene ID: k141_83135_5
Type: CAZyme
Location: 3712 - 5496 (-)
Type: CAZyme
Location: 3712 - 5496 (-)
Gene ID: k141_83135_6
Type: CAZyme
Location: 5514 - 6677 (-)
Type: CAZyme
Location: 5514 - 6677 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Vagococcaceae
Genus
Vagococcus
Species
Vagococcus silagei
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.