Cluster: CGMR066211_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR066211
- CGC Family ID: CGCFAM_03005
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_10329 | k141_10329_13 | 15327 | 16550 | + | 2.A.50.2.1 |
| pfam | k141_10329 | k141_10329_14 | 16576 | 16806 | + | PP-binding |
| pfam | k141_10329 | k141_10329_15 | 16806 | 18080 | + | DltD |
| TC | k141_10329 | k141_10329_16 | 18088 | 18705 | + | 3.A.7.14.1 |
| CAZyme | k141_10329 | k141_10329_17 | 19021 | 19908 | - | CE4 |
Gene ID: k141_10329_13
Type: TC
Location: 15327 - 16550 (+)
Type: TC
Location: 15327 - 16550 (+)
Gene ID: k141_10329_14
Type: pfam
Location: 16576 - 16806 (+)
Type: pfam
Location: 16576 - 16806 (+)
Gene ID: k141_10329_15
Type: pfam
Location: 16806 - 18080 (+)
Type: pfam
Location: 16806 - 18080 (+)
Gene ID: k141_10329_16
Type: TC
Location: 18088 - 18705 (+)
Type: TC
Location: 18088 - 18705 (+)
Gene ID: k141_10329_17
Type: CAZyme
Location: 19021 - 19908 (-)
Type: CAZyme
Location: 19021 - 19908 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Vagococcaceae
Genus
Vagococcus
Species
Vagococcus silagei
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.