Cluster: CGMR066001_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR066001
- CGC Family ID: CGCFAM_00458
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_23037 | k141_23037_134 | 134637 | 135299 | - | 9.B.28.1.8 |
| TC | k141_23037 | k141_23037_135 | 135315 | 137102 | - | 3.A.1.106.2 |
| CAZyme | k141_23037 | k141_23037_136 | 137114 | 137794 | - | CE12 |
| CAZyme | k141_23037 | k141_23037_137 | 137751 | 139553 | - | CBM91 | GH43_12 |
| CAZyme | k141_23037 | k141_23037_138 | 139516 | 141036 | - | CBM91 | GH43_10 |
| TC | k141_23037 | k141_23037_139 | 141185 | 142024 | - | 3.A.1.1.9 |
| TC | k141_23037 | k141_23037_140 | 142038 | 143003 | - | 3.A.1.1.9 |
Gene ID: k141_23037_134
Type: TC
Location: 134637 - 135299 (-)
Type: TC
Location: 134637 - 135299 (-)
Gene ID: k141_23037_135
Type: TC
Location: 135315 - 137102 (-)
Type: TC
Location: 135315 - 137102 (-)
Gene ID: k141_23037_136
Type: CAZyme
Location: 137114 - 137794 (-)
Type: CAZyme
Location: 137114 - 137794 (-)
Gene ID: k141_23037_137
Type: CAZyme
Location: 137751 - 139553 (-)
Type: CAZyme
Location: 137751 - 139553 (-)
Gene ID: k141_23037_138
Type: CAZyme
Location: 139516 - 141036 (-)
Type: CAZyme
Location: 139516 - 141036 (-)
Gene ID: k141_23037_139
Type: TC
Location: 141185 - 142024 (-)
Type: TC
Location: 141185 - 142024 (-)
Gene ID: k141_23037_140
Type: TC
Location: 142038 - 143003 (-)
Type: TC
Location: 142038 - 143003 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Caccovicinus
Species
Caccovicinus merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.