Cluster: CGMR066001_CGC50
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR066001
- CGC Family ID: CGCFAM_04453
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_44818 | k141_44818_62 | 55718 | 58366 | + | 3.A.3.2.21 |
| pfam | k141_44818 | k141_44818_63 | 58616 | 59851 | - | MFS_1 |
| TC | k141_44818 | k141_44818_64 | 60251 | 61162 | + | 3.A.1.1.20 |
| TC | k141_44818 | k141_44818_65 | 61175 | 61993 | + | 3.A.1.1.39 |
| STP | k141_44818 | k141_44818_66 | 62024 | 63316 | + | SBP_bac_1 |
| NULL(UNKNOWN) | k141_44818 | k141_44818_67 | 63454 | 65925 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_44818 | k141_44818_68 | 65937 | 67265 | + | GH28 |
| CAZyme | k141_44818 | k141_44818_69 | 67315 | 68421 | + | GH105 |
Gene ID: k141_44818_62
Type: TC
Location: 55718 - 58366 (+)
Type: TC
Location: 55718 - 58366 (+)
Gene ID: k141_44818_63
Type: pfam
Location: 58616 - 59851 (-)
Type: pfam
Location: 58616 - 59851 (-)
Gene ID: k141_44818_64
Type: TC
Location: 60251 - 61162 (+)
Type: TC
Location: 60251 - 61162 (+)
Gene ID: k141_44818_65
Type: TC
Location: 61175 - 61993 (+)
Type: TC
Location: 61175 - 61993 (+)
Gene ID: k141_44818_66
Type: STP
Location: 62024 - 63316 (+)
Type: STP
Location: 62024 - 63316 (+)
Gene ID: k141_44818_67
Type:
Location: 63454 - 65925 (+)
Type:
Location: 63454 - 65925 (+)
Gene ID: k141_44818_68
Type: CAZyme
Location: 65937 - 67265 (+)
Type: CAZyme
Location: 65937 - 67265 (+)
Gene ID: k141_44818_69
Type: CAZyme
Location: 67315 - 68421 (+)
Type: CAZyme
Location: 67315 - 68421 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Caccovicinus
Species
Caccovicinus merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.