Cluster: CGMR066001_CGC49
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR066001
- CGC Family ID: CGCFAM_00126
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_10250 | k141_10250_93 | 106324 | 107496 | - | GT2 |
| CAZyme | k141_10250 | k141_10250_94 | 107533 | 108429 | - | GT2 |
| CAZyme | k141_10250 | k141_10250_95 | 108416 | 109441 | - | GT8 |
| pfam | k141_10250 | k141_10250_96 | 109483 | 110592 | - | Amino_oxidase | GLF | NAD_binding_8 |
| NULL(UNKNOWN) | k141_10250 | k141_10250_97 | 110816 | 111430 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_10250 | k141_10250_98 | 111427 | 112194 | + | 3.A.1.17.1 |
| TC | k141_10250 | k141_10250_99 | 112181 | 112936 | + | 3.A.1.16.2 |
Gene ID: k141_10250_93
Type: CAZyme
Location: 106324 - 107496 (-)
Type: CAZyme
Location: 106324 - 107496 (-)
Gene ID: k141_10250_94
Type: CAZyme
Location: 107533 - 108429 (-)
Type: CAZyme
Location: 107533 - 108429 (-)
Gene ID: k141_10250_95
Type: CAZyme
Location: 108416 - 109441 (-)
Type: CAZyme
Location: 108416 - 109441 (-)
Gene ID: k141_10250_96
Type: pfam
Location: 109483 - 110592 (-)
Type: pfam
Location: 109483 - 110592 (-)
Gene ID: k141_10250_97
Type:
Location: 110816 - 111430 (+)
Type:
Location: 110816 - 111430 (+)
Gene ID: k141_10250_98
Type: TC
Location: 111427 - 112194 (+)
Type: TC
Location: 111427 - 112194 (+)
Gene ID: k141_10250_99
Type: TC
Location: 112181 - 112936 (+)
Type: TC
Location: 112181 - 112936 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Caccovicinus
Species
Caccovicinus merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.