Cluster: CGMR066001_CGC48
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR066001
- CGC Family ID: CGCFAM_08558
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_10250 | k141_10250_82 | 91947 | 93674 | - | GH13_31 |
| CAZyme | k141_10250 | k141_10250_83 | 93690 | 96104 | - | GH31_15 |
| TC | k141_10250 | k141_10250_84 | 96144 | 96965 | - | 3.A.1.1.39 |
| TC | k141_10250 | k141_10250_85 | 96978 | 97856 | - | 3.A.1.1.11 |
| STP | k141_10250 | k141_10250_86 | 97946 | 99304 | - | SBP_bac_1 |
| TF | k141_10250 | k141_10250_87 | 99665 | 100684 | + | LacI |
| TC | k141_10250 | k141_10250_88 | 100749 | 102209 | - | 2.A.66.2.6 |
| CAZyme | k141_10250 | k141_10250_89 | 102239 | 103237 | - | GT2 |
Gene ID: k141_10250_82
Type: CAZyme
Location: 91947 - 93674 (-)
Type: CAZyme
Location: 91947 - 93674 (-)
Gene ID: k141_10250_83
Type: CAZyme
Location: 93690 - 96104 (-)
Type: CAZyme
Location: 93690 - 96104 (-)
Gene ID: k141_10250_84
Type: TC
Location: 96144 - 96965 (-)
Type: TC
Location: 96144 - 96965 (-)
Gene ID: k141_10250_85
Type: TC
Location: 96978 - 97856 (-)
Type: TC
Location: 96978 - 97856 (-)
Gene ID: k141_10250_86
Type: STP
Location: 97946 - 99304 (-)
Type: STP
Location: 97946 - 99304 (-)
Gene ID: k141_10250_87
Type: TF
Location: 99665 - 100684 (+)
Type: TF
Location: 99665 - 100684 (+)
Gene ID: k141_10250_88
Type: TC
Location: 100749 - 102209 (-)
Type: TC
Location: 100749 - 102209 (-)
Gene ID: k141_10250_89
Type: CAZyme
Location: 102239 - 103237 (-)
Type: CAZyme
Location: 102239 - 103237 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Caccovicinus
Species
Caccovicinus merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.