Cluster: CGMR066001_CGC43
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR066001
- CGC Family ID: CGCFAM_08880
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_10250 | k141_10250_3 | 2363 | 3610 | - | CE4 |
| STP | k141_10250 | k141_10250_4 | 3825 | 4376 | - | HD |
| NULL(UNKNOWN) | k141_10250 | k141_10250_5 | 4726 | 5523 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_10250 | k141_10250_6 | 5572 | 7122 | - | GH77 |
| TF | k141_10250 | k141_10250_7 | 7199 | 8116 | - | HTH_AraC | HTH_AraC |
| CAZyme | k141_10250 | k141_10250_8 | 8297 | 10561 | + | GT35 |
| TC | k141_10250 | k141_10250_9 | 10720 | 11703 | - | 1.A.23.2.2 |
| CAZyme | k141_10250 | k141_10250_10 | 11793 | 14216 | - | CBM48 | GH13_9 |
Gene ID: k141_10250_3
Type: CAZyme
Location: 2363 - 3610 (-)
Type: CAZyme
Location: 2363 - 3610 (-)
Gene ID: k141_10250_4
Type: STP
Location: 3825 - 4376 (-)
Type: STP
Location: 3825 - 4376 (-)
Gene ID: k141_10250_5
Type:
Location: 4726 - 5523 (+)
Type:
Location: 4726 - 5523 (+)
Gene ID: k141_10250_6
Type: CAZyme
Location: 5572 - 7122 (-)
Type: CAZyme
Location: 5572 - 7122 (-)
Gene ID: k141_10250_7
Type: TF
Location: 7199 - 8116 (-)
Type: TF
Location: 7199 - 8116 (-)
Gene ID: k141_10250_8
Type: CAZyme
Location: 8297 - 10561 (+)
Type: CAZyme
Location: 8297 - 10561 (+)
Gene ID: k141_10250_9
Type: TC
Location: 10720 - 11703 (-)
Type: TC
Location: 10720 - 11703 (-)
Gene ID: k141_10250_10
Type: CAZyme
Location: 11793 - 14216 (-)
Type: CAZyme
Location: 11793 - 14216 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Caccovicinus
Species
Caccovicinus merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.