Cluster: CGMR066001_CGC41
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR066001
- CGC Family ID: CGCFAM_00247
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_14646 | k141_14646_5 | 2114 | 3547 | - | GH32 |
| TC | k141_14646 | k141_14646_6 | 3590 | 4450 | - | 3.A.1.1.28 |
| TC | k141_14646 | k141_14646_7 | 4450 | 5322 | - | 3.A.1.1.45 |
| TC | k141_14646 | k141_14646_8 | 5339 | 6718 | - | 3.A.1.1.45 |
| TF | k141_14646 | k141_14646_9 | 7003 | 8037 | + | LacI |
| TC | k141_14646 | k141_14646_10 | 8049 | 9134 | - | 3.A.1.13.2 |
| TC | k141_14646 | k141_14646_11 | 9131 | 10168 | - | 3.A.1.13.2 |
Gene ID: k141_14646_5
Type: CAZyme
Location: 2114 - 3547 (-)
Type: CAZyme
Location: 2114 - 3547 (-)
Gene ID: k141_14646_6
Type: TC
Location: 3590 - 4450 (-)
Type: TC
Location: 3590 - 4450 (-)
Gene ID: k141_14646_7
Type: TC
Location: 4450 - 5322 (-)
Type: TC
Location: 4450 - 5322 (-)
Gene ID: k141_14646_8
Type: TC
Location: 5339 - 6718 (-)
Type: TC
Location: 5339 - 6718 (-)
Gene ID: k141_14646_9
Type: TF
Location: 7003 - 8037 (+)
Type: TF
Location: 7003 - 8037 (+)
Gene ID: k141_14646_10
Type: TC
Location: 8049 - 9134 (-)
Type: TC
Location: 8049 - 9134 (-)
Gene ID: k141_14646_11
Type: TC
Location: 9131 - 10168 (-)
Type: TC
Location: 9131 - 10168 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Caccovicinus
Species
Caccovicinus merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.