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Cluster: CGMR066001_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_6931 k141_6931_38 35781 36473 - 9.B.20.1.4
pfam k141_6931 k141_6931_39 36831 37709 + EamA | EamA
NULL(UNKNOWN) k141_6931 k141_6931_40 37794 38012 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_6931 k141_6931_41 38101 39312 - GH3
NULL(UNKNOWN) k141_6931 k141_6931_42 39442 39594 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) k141_6931 k141_6931_43 39591 40130 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_6931 k141_6931_44 40309 42549 - GH3
TC k141_6931 k141_6931_45 42563 43966 - 2.A.2.3.1
CAZyme k141_6931 k141_6931_46 44041 46308 - GH2
Gene ID: k141_6931_38
Type: TC
Location: 35781 - 36473 (-)
Gene ID: k141_6931_39
Type: pfam
Location: 36831 - 37709 (+)
Gene ID: k141_6931_40
Type:
Location: 37794 - 38012 (-)
Gene ID: k141_6931_41
Type: CAZyme
Location: 38101 - 39312 (-)
Gene ID: k141_6931_42
Type:
Location: 39442 - 39594 (-)
Gene ID: k141_6931_43
Type:
Location: 39591 - 40130 (-)
Gene ID: k141_6931_44
Type: CAZyme
Location: 40309 - 42549 (-)
Gene ID: k141_6931_45
Type: TC
Location: 42563 - 43966 (-)
Gene ID: k141_6931_46
Type: CAZyme
Location: 44041 - 46308 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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