Cluster: CGMR066001_CGC39
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR066001
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_6931 | k141_6931_18 | 13822 | 14691 | - | 2.A.115.1.1 |
| TC | k141_6931 | k141_6931_19 | 14749 | 15468 | - | 9.B.120.1.3 |
| pfam | k141_6931 | k141_6931_20 | 15691 | 16887 | + | Iso_dh |
| STP | k141_6931 | k141_6931_21 | 16970 | 17878 | - | GGDEF |
| CAZyme | k141_6931 | k141_6931_22 | 17982 | 19634 | - | GH13_31 |
| TC | k141_6931 | k141_6931_23 | 19906 | 21894 | - | 3.A.1.135.5 |
| TC | k141_6931 | k141_6931_24 | 21848 | 23590 | - | 3.A.1.135.5 |
Gene ID: k141_6931_18
Type: TC
Location: 13822 - 14691 (-)
Type: TC
Location: 13822 - 14691 (-)
Gene ID: k141_6931_19
Type: TC
Location: 14749 - 15468 (-)
Type: TC
Location: 14749 - 15468 (-)
Gene ID: k141_6931_20
Type: pfam
Location: 15691 - 16887 (+)
Type: pfam
Location: 15691 - 16887 (+)
Gene ID: k141_6931_21
Type: STP
Location: 16970 - 17878 (-)
Type: STP
Location: 16970 - 17878 (-)
Gene ID: k141_6931_22
Type: CAZyme
Location: 17982 - 19634 (-)
Type: CAZyme
Location: 17982 - 19634 (-)
Gene ID: k141_6931_23
Type: TC
Location: 19906 - 21894 (-)
Type: TC
Location: 19906 - 21894 (-)
Gene ID: k141_6931_24
Type: TC
Location: 21848 - 23590 (-)
Type: TC
Location: 21848 - 23590 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Caccovicinus
Species
Caccovicinus merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.