Cluster: CGMR066001_CGC34
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR066001
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_2249 | k141_2249_61 | 56223 | 57938 | + | CE1 |
| TF | k141_2249 | k141_2249_62 | 58080 | 58850 | + | GntR |
| TC | k141_2249 | k141_2249_63 | 59166 | 60173 | + | 2.A.56.1.6 |
| pfam | k141_2249 | k141_2249_64 | 60201 | 60704 | + | DctQ |
| TC | k141_2249 | k141_2249_65 | 60701 | 61978 | + | 2.A.56.1.1 |
Gene ID: k141_2249_61
Type: CAZyme
Location: 56223 - 57938 (+)
Type: CAZyme
Location: 56223 - 57938 (+)
Gene ID: k141_2249_62
Type: TF
Location: 58080 - 58850 (+)
Type: TF
Location: 58080 - 58850 (+)
Gene ID: k141_2249_63
Type: TC
Location: 59166 - 60173 (+)
Type: TC
Location: 59166 - 60173 (+)
Gene ID: k141_2249_64
Type: pfam
Location: 60201 - 60704 (+)
Type: pfam
Location: 60201 - 60704 (+)
Gene ID: k141_2249_65
Type: TC
Location: 60701 - 61978 (+)
Type: TC
Location: 60701 - 61978 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Caccovicinus
Species
Caccovicinus merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.