Cluster: CGMR066001_CGC33
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR066001
- CGC Family ID: CGCFAM_01279
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_2249 | k141_2249_37 | 34347 | 35462 | - | GH36 |
| CAZyme | k141_2249 | k141_2249_38 | 35632 | 36954 | - | GH27 |
| TF | k141_2249 | k141_2249_39 | 37084 | 37956 | + | HTH_AraC |
| TC | k141_2249 | k141_2249_40 | 38198 | 38692 | + | 3.D.1.5.1 |
| STP | k141_2249 | k141_2249_41 | 38696 | 39253 | + | HATPase_c |
| NULL(UNKNOWN) | k141_2249 | k141_2249_42 | 39283 | 39660 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_2249 | k141_2249_43 | 39675 | 41462 | + | 3.D.1.5.1 |
Gene ID: k141_2249_37
Type: CAZyme
Location: 34347 - 35462 (-)
Type: CAZyme
Location: 34347 - 35462 (-)
Gene ID: k141_2249_38
Type: CAZyme
Location: 35632 - 36954 (-)
Type: CAZyme
Location: 35632 - 36954 (-)
Gene ID: k141_2249_39
Type: TF
Location: 37084 - 37956 (+)
Type: TF
Location: 37084 - 37956 (+)
Gene ID: k141_2249_40
Type: TC
Location: 38198 - 38692 (+)
Type: TC
Location: 38198 - 38692 (+)
Gene ID: k141_2249_41
Type: STP
Location: 38696 - 39253 (+)
Type: STP
Location: 38696 - 39253 (+)
Gene ID: k141_2249_42
Type:
Location: 39283 - 39660 (+)
Type:
Location: 39283 - 39660 (+)
Gene ID: k141_2249_43
Type: TC
Location: 39675 - 41462 (+)
Type: TC
Location: 39675 - 41462 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Caccovicinus
Species
Caccovicinus merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.