Cluster: CGMR066001_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR066001
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_15987 | k141_15987_7 | 7405 | 9267 | + | 4.A.2.1.2 |
| CAZyme | k141_15987 | k141_15987_8 | 9526 | 11541 | - | GH31_4 |
| TF | k141_15987 | k141_15987_9 | 11727 | 12512 | + | HTH_AraC |
| NULL(UNKNOWN) | k141_15987 | k141_15987_10 | 12749 | 13018 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_15987 | k141_15987_11 | 13070 | 14191 | + | GT2 |
Gene ID: k141_15987_7
Type: TC
Location: 7405 - 9267 (+)
Type: TC
Location: 7405 - 9267 (+)
Gene ID: k141_15987_8
Type: CAZyme
Location: 9526 - 11541 (-)
Type: CAZyme
Location: 9526 - 11541 (-)
Gene ID: k141_15987_9
Type: TF
Location: 11727 - 12512 (+)
Type: TF
Location: 11727 - 12512 (+)
Gene ID: k141_15987_10
Type:
Location: 12749 - 13018 (+)
Type:
Location: 12749 - 13018 (+)
Gene ID: k141_15987_11
Type: CAZyme
Location: 13070 - 14191 (+)
Type: CAZyme
Location: 13070 - 14191 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Caccovicinus
Species
Caccovicinus merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.