Cluster: CGMR066001_CGC29
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR066001
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_48833 | k141_48833_104 | 108334 | 109554 | + | PL22_2 |
| pfam | k141_48833 | k141_48833_105 | 109933 | 110322 | + | Glyco_hydro_30 |
| CAZyme | k141_48833 | k141_48833_106 | 110270 | 110956 | + | GH30_1 |
| STP | k141_48833 | k141_48833_107 | 111017 | 111679 | + | CheR |
| TF | k141_48833 | k141_48833_108 | 111761 | 111982 | + | Trans_reg_C |
| TC | k141_48833 | k141_48833_109 | 112002 | 112868 | + | 2.A.7.2.1 |
Gene ID: k141_48833_104
Type: CAZyme
Location: 108334 - 109554 (+)
Type: CAZyme
Location: 108334 - 109554 (+)
Gene ID: k141_48833_105
Type: pfam
Location: 109933 - 110322 (+)
Type: pfam
Location: 109933 - 110322 (+)
Gene ID: k141_48833_106
Type: CAZyme
Location: 110270 - 110956 (+)
Type: CAZyme
Location: 110270 - 110956 (+)
Gene ID: k141_48833_107
Type: STP
Location: 111017 - 111679 (+)
Type: STP
Location: 111017 - 111679 (+)
Gene ID: k141_48833_108
Type: TF
Location: 111761 - 111982 (+)
Type: TF
Location: 111761 - 111982 (+)
Gene ID: k141_48833_109
Type: TC
Location: 112002 - 112868 (+)
Type: TC
Location: 112002 - 112868 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Caccovicinus
Species
Caccovicinus merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.