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Cluster: CGMR066001_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_48833 k141_48833_20 20930 22435 + GH51_1
TF k141_48833 k141_48833_21 22547 23461 - HTH_1
TC k141_48833 k141_48833_22 23967 24911 + 3.A.1.5.20
TC k141_48833 k141_48833_23 24924 25778 + 3.A.1.5.20
TC k141_48833 k141_48833_24 25794 26927 + 3.A.1.5.29
TC k141_48833 k141_48833_25 26954 27820 + 3.A.1.5.20
TC k141_48833 k141_48833_26 27839 29482 + 3.A.1.5.27
pfam k141_48833 k141_48833_27 29508 30500 + UxuA
CAZyme k141_48833 k141_48833_28 30503 31618 + PL38
TC k141_48833 k141_48833_29 31818 33182 + 2.A.66.1.33
Gene ID: k141_48833_20
Type: CAZyme
Location: 20930 - 22435 (+)
Gene ID: k141_48833_21
Type: TF
Location: 22547 - 23461 (-)
Gene ID: k141_48833_22
Type: TC
Location: 23967 - 24911 (+)
Gene ID: k141_48833_23
Type: TC
Location: 24924 - 25778 (+)
Gene ID: k141_48833_24
Type: TC
Location: 25794 - 26927 (+)
Gene ID: k141_48833_25
Type: TC
Location: 26954 - 27820 (+)
Gene ID: k141_48833_26
Type: TC
Location: 27839 - 29482 (+)
Gene ID: k141_48833_27
Type: pfam
Location: 29508 - 30500 (+)
Gene ID: k141_48833_28
Type: CAZyme
Location: 30503 - 31618 (+)
Gene ID: k141_48833_29
Type: TC
Location: 31818 - 33182 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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