Cluster: CGMR066001_CGC27
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR066001
- CGC Family ID: CGCFAM_00972
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_39056 | k141_39056_37 | 41870 | 44986 | - | GT27 |
| NULL(UNKNOWN) | k141_39056 | k141_39056_38 | 44983 | 45816 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_39056 | k141_39056_39 | 45813 | 47171 | - | 3.A.1.103.6 |
| pfam | k141_39056 | k141_39056_40 | 47470 | 48267 | - | ABC2_membrane_6 |
| pfam | k141_39056 | k141_39056_41 | 48272 | 49078 | - | ABC2_membrane_6 |
| TC | k141_39056 | k141_39056_42 | 49065 | 50063 | - | 3.A.1.141.1 |
Gene ID: k141_39056_37
Type: CAZyme
Location: 41870 - 44986 (-)
Type: CAZyme
Location: 41870 - 44986 (-)
Gene ID: k141_39056_38
Type:
Location: 44983 - 45816 (-)
Type:
Location: 44983 - 45816 (-)
Gene ID: k141_39056_39
Type: TC
Location: 45813 - 47171 (-)
Type: TC
Location: 45813 - 47171 (-)
Gene ID: k141_39056_40
Type: pfam
Location: 47470 - 48267 (-)
Type: pfam
Location: 47470 - 48267 (-)
Gene ID: k141_39056_41
Type: pfam
Location: 48272 - 49078 (-)
Type: pfam
Location: 48272 - 49078 (-)
Gene ID: k141_39056_42
Type: TC
Location: 49065 - 50063 (-)
Type: TC
Location: 49065 - 50063 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Caccovicinus
Species
Caccovicinus merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.