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Cluster: CGMR066001_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_22704 k141_22704_73 75403 77526 - GH154
CAZyme k141_22704 k141_22704_74 77540 78622 - GH88
TC k141_22704 k141_22704_75 78651 79481 - 3.A.1.1.34
TC k141_22704 k141_22704_76 79497 80402 - 3.A.1.1.11
STP k141_22704 k141_22704_77 80585 81886 - SBP_bac_1
NULL(UNKNOWN) k141_22704 k141_22704_78 81886 82824 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_22704 k141_22704_79 82790 84682 - 8.A.59.2.1
CAZyme k141_22704 k141_22704_80 84841 87984 - GH2
pfam k141_22704 k141_22704_81 88326 89675 + Peripla_BP_4 | Peripla_BP_7
TC k141_22704 k141_22704_82 89809 91317 + 3.A.1.2.3
TC k141_22704 k141_22704_83 91333 92982 + 3.A.1.2.3
Gene ID: k141_22704_73
Type: CAZyme
Location: 75403 - 77526 (-)
Gene ID: k141_22704_74
Type: CAZyme
Location: 77540 - 78622 (-)
Gene ID: k141_22704_75
Type: TC
Location: 78651 - 79481 (-)
Gene ID: k141_22704_76
Type: TC
Location: 79497 - 80402 (-)
Gene ID: k141_22704_77
Type: STP
Location: 80585 - 81886 (-)
Gene ID: k141_22704_78
Type:
Location: 81886 - 82824 (-)
Gene ID: k141_22704_79
Type: TC
Location: 82790 - 84682 (-)
Gene ID: k141_22704_80
Type: CAZyme
Location: 84841 - 87984 (-)
Gene ID: k141_22704_81
Type: pfam
Location: 88326 - 89675 (+)
Gene ID: k141_22704_82
Type: TC
Location: 89809 - 91317 (+)
Gene ID: k141_22704_83
Type: TC
Location: 91333 - 92982 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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