Cluster: CGMR066001_CGC20
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR066001
- CGC Family ID: CGCFAM_00006
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_18560 | k141_18560_6 | 4825 | 6840 | + | 9.B.18.2.1 |
| STP | k141_18560 | k141_18560_7 | 6912 | 8132 | + | Aminotran_1_2 |
| TC | k141_18560 | k141_18560_8 | 8172 | 8864 | + | 9.B.18.1.3 |
| CAZyme | k141_18560 | k141_18560_9 | 8867 | 9904 | + | GT2 |
| pfam | k141_18560 | k141_18560_10 | 9904 | 10785 | + | LicD |
| CAZyme | k141_18560 | k141_18560_11 | 10829 | 12109 | + | GT4 |
| pfam | k141_18560 | k141_18560_12 | 12144 | 12815 | + | Hexapep | Hexapep_2 |
| TC | k141_18560 | k141_18560_13 | 12794 | 14332 | + | 2.A.66.1.40 |
Gene ID: k141_18560_6
Type: TC
Location: 4825 - 6840 (+)
Type: TC
Location: 4825 - 6840 (+)
Gene ID: k141_18560_7
Type: STP
Location: 6912 - 8132 (+)
Type: STP
Location: 6912 - 8132 (+)
Gene ID: k141_18560_8
Type: TC
Location: 8172 - 8864 (+)
Type: TC
Location: 8172 - 8864 (+)
Gene ID: k141_18560_9
Type: CAZyme
Location: 8867 - 9904 (+)
Type: CAZyme
Location: 8867 - 9904 (+)
Gene ID: k141_18560_10
Type: pfam
Location: 9904 - 10785 (+)
Type: pfam
Location: 9904 - 10785 (+)
Gene ID: k141_18560_11
Type: CAZyme
Location: 10829 - 12109 (+)
Type: CAZyme
Location: 10829 - 12109 (+)
Gene ID: k141_18560_12
Type: pfam
Location: 12144 - 12815 (+)
Type: pfam
Location: 12144 - 12815 (+)
Gene ID: k141_18560_13
Type: TC
Location: 12794 - 14332 (+)
Type: TC
Location: 12794 - 14332 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Caccovicinus
Species
Caccovicinus merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.