Cluster: CGMR066001_CGC2
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR066001
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_14644 | k141_14644_2 | 1215 | 3557 | + | GH95 |
| pfam | k141_14644 | k141_14644_3 | 3554 | 4522 | + | RhaT |
| TF | k141_14644 | k141_14644_4 | 4584 | 5597 | - | LacI |
| CAZyme | k141_14644 | k141_14644_5 | 5665 | 7746 | - | PL12_1 |
| TC | k141_14644 | k141_14644_6 | 7793 | 8596 | - | 4.A.6.1.14 |
| TC | k141_14644 | k141_14644_7 | 8586 | 9374 | - | 4.A.6.1.14 |
| TC | k141_14644 | k141_14644_8 | 9421 | 9912 | - | 4.A.6.1.14 |
| CAZyme | k141_14644 | k141_14644_9 | 10062 | 11255 | - | GH88 |
| TC | k141_14644 | k141_14644_10 | 11285 | 11716 | - | 4.A.6.1.14 |
| pfam | k141_14644 | k141_14644_11 | 12239 | 12670 | + | PrcB_C |
| pfam | k141_14644 | k141_14644_12 | 12778 | 13437 | + | Hexapep | SATase_N |
| CAZyme | k141_14644 | k141_14644_13 | 13496 | 15055 | + | CBM50 |
| pfam | k141_14644 | k141_14644_14 | 15485 | 15757 | + | GIY-YIG | T5orf172 |
| TC | k141_14644 | k141_14644_15 | 15791 | 16441 | - | 1.C.113.1.2 |
Gene ID: k141_14644_2
Type: CAZyme
Location: 1215 - 3557 (+)
Type: CAZyme
Location: 1215 - 3557 (+)
Gene ID: k141_14644_3
Type: pfam
Location: 3554 - 4522 (+)
Type: pfam
Location: 3554 - 4522 (+)
Gene ID: k141_14644_4
Type: TF
Location: 4584 - 5597 (-)
Type: TF
Location: 4584 - 5597 (-)
Gene ID: k141_14644_5
Type: CAZyme
Location: 5665 - 7746 (-)
Type: CAZyme
Location: 5665 - 7746 (-)
Gene ID: k141_14644_6
Type: TC
Location: 7793 - 8596 (-)
Type: TC
Location: 7793 - 8596 (-)
Gene ID: k141_14644_7
Type: TC
Location: 8586 - 9374 (-)
Type: TC
Location: 8586 - 9374 (-)
Gene ID: k141_14644_8
Type: TC
Location: 9421 - 9912 (-)
Type: TC
Location: 9421 - 9912 (-)
Gene ID: k141_14644_9
Type: CAZyme
Location: 10062 - 11255 (-)
Type: CAZyme
Location: 10062 - 11255 (-)
Gene ID: k141_14644_10
Type: TC
Location: 11285 - 11716 (-)
Type: TC
Location: 11285 - 11716 (-)
Gene ID: k141_14644_11
Type: pfam
Location: 12239 - 12670 (+)
Type: pfam
Location: 12239 - 12670 (+)
Gene ID: k141_14644_12
Type: pfam
Location: 12778 - 13437 (+)
Type: pfam
Location: 12778 - 13437 (+)
Gene ID: k141_14644_13
Type: CAZyme
Location: 13496 - 15055 (+)
Type: CAZyme
Location: 13496 - 15055 (+)
Gene ID: k141_14644_14
Type: pfam
Location: 15485 - 15757 (+)
Type: pfam
Location: 15485 - 15757 (+)
Gene ID: k141_14644_15
Type: TC
Location: 15791 - 16441 (-)
Type: TC
Location: 15791 - 16441 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Caccovicinus
Species
Caccovicinus merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.