Cluster: CGMR066001_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR066001
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_16603 | k141_16603_6 | 4208 | 5536 | - | 3.A.1.122.2 |
| NULL(UNKNOWN) | k141_16603 | k141_16603_7 | 5523 | 7739 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_16603 | k141_16603_8 | 7736 | 8482 | - | 3.A.1.122.7 |
| TF | k141_16603 | k141_16603_9 | 8620 | 9414 | - | HTH_AraC |
| CAZyme | k141_16603 | k141_16603_10 | 9596 | 11905 | + | GH3 |
| TC | k141_16603 | k141_16603_11 | 11925 | 14630 | - | 3.A.3.4.1 |
Gene ID: k141_16603_6
Type: TC
Location: 4208 - 5536 (-)
Type: TC
Location: 4208 - 5536 (-)
Gene ID: k141_16603_7
Type:
Location: 5523 - 7739 (-)
Type:
Location: 5523 - 7739 (-)
Gene ID: k141_16603_8
Type: TC
Location: 7736 - 8482 (-)
Type: TC
Location: 7736 - 8482 (-)
Gene ID: k141_16603_9
Type: TF
Location: 8620 - 9414 (-)
Type: TF
Location: 8620 - 9414 (-)
Gene ID: k141_16603_10
Type: CAZyme
Location: 9596 - 11905 (+)
Type: CAZyme
Location: 9596 - 11905 (+)
Gene ID: k141_16603_11
Type: TC
Location: 11925 - 14630 (-)
Type: TC
Location: 11925 - 14630 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Caccovicinus
Species
Caccovicinus merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.