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Cluster: CGMR066001_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_15656 k141_15656_46 54554 56104 - 3.A.1.121.3
TF k141_15656 k141_15656_47 56983 57201 - MerR
TC k141_15656 k141_15656_48 57219 57746 - 2.A.2.2.2
TF k141_15656 k141_15656_49 57932 58990 - LacI
CAZyme k141_15656 k141_15656_50 59008 60879 - GH13_4
TC k141_15656 k141_15656_51 61118 63010 - 3.A.1.135.5
TC k141_15656 k141_15656_52 63003 64745 - 3.A.1.135.5
TF k141_15656 k141_15656_53 64708 65187 - MarR
TC k141_15656 k141_15656_54 65326 65946 - 2.A.115.2.14
pfam k141_15656 k141_15656_55 66103 66915 - PHP
CAZyme k141_15656 k141_15656_56 67200 69344 - GH13_39
TC k141_15656 k141_15656_57 69744 71564 - 3.A.16.1.2
Gene ID: k141_15656_46
Type: TC
Location: 54554 - 56104 (-)
Gene ID: k141_15656_47
Type: TF
Location: 56983 - 57201 (-)
Gene ID: k141_15656_48
Type: TC
Location: 57219 - 57746 (-)
Gene ID: k141_15656_49
Type: TF
Location: 57932 - 58990 (-)
Gene ID: k141_15656_50
Type: CAZyme
Location: 59008 - 60879 (-)
Gene ID: k141_15656_51
Type: TC
Location: 61118 - 63010 (-)
Gene ID: k141_15656_52
Type: TC
Location: 63003 - 64745 (-)
Gene ID: k141_15656_53
Type: TF
Location: 64708 - 65187 (-)
Gene ID: k141_15656_54
Type: TC
Location: 65326 - 65946 (-)
Gene ID: k141_15656_55
Type: pfam
Location: 66103 - 66915 (-)
Gene ID: k141_15656_56
Type: CAZyme
Location: 67200 - 69344 (-)
Gene ID: k141_15656_57
Type: TC
Location: 69744 - 71564 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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