Cluster: CGMR066001_CGC14
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR066001
- CGC Family ID: CGCFAM_01274
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_15656 | k141_15656_1 | 204 | 2234 | - | GH42 |
| TF | k141_15656 | k141_15656_2 | 2349 | 3161 | + | HTH_AraC | HTH_AraC |
| TC | k141_15656 | k141_15656_3 | 3509 | 5311 | + | 3.A.1.106.2 |
Gene ID: k141_15656_1
Type: CAZyme
Location: 204 - 2234 (-)
Type: CAZyme
Location: 204 - 2234 (-)
Gene ID: k141_15656_2
Type: TF
Location: 2349 - 3161 (+)
Type: TF
Location: 2349 - 3161 (+)
Gene ID: k141_15656_3
Type: TC
Location: 3509 - 5311 (+)
Type: TC
Location: 3509 - 5311 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Caccovicinus
Species
Caccovicinus merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.