Cluster: CGMR066001_CGC13
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR066001
- CGC Family ID: CGCFAM_05733
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_40458 | k141_40458_42 | 46686 | 49412 | + | GT51 |
| pfam | k141_40458 | k141_40458_43 | 49528 | 50508 | - | A_deaminase |
| pfam | k141_40458 | k141_40458_44 | 50501 | 50941 | - | dCMP_cyt_deam_1 | dCMP_cyt_deam_2 |
| TC | k141_40458 | k141_40458_45 | 51073 | 52008 | - | 3.A.1.2.12 |
| TC | k141_40458 | k141_40458_46 | 52009 | 53076 | - | 3.A.1.2.12 |
| TC | k141_40458 | k141_40458_47 | 53069 | 54613 | - | 3.A.1.2.17 |
| pfam | k141_40458 | k141_40458_48 | 54634 | 56358 | - | YjjI-like |
| TC | k141_40458 | k141_40458_49 | 56408 | 57529 | - | 3.A.1.2.12 |
Gene ID: k141_40458_42
Type: CAZyme
Location: 46686 - 49412 (+)
Type: CAZyme
Location: 46686 - 49412 (+)
Gene ID: k141_40458_43
Type: pfam
Location: 49528 - 50508 (-)
Type: pfam
Location: 49528 - 50508 (-)
Gene ID: k141_40458_44
Type: pfam
Location: 50501 - 50941 (-)
Type: pfam
Location: 50501 - 50941 (-)
Gene ID: k141_40458_45
Type: TC
Location: 51073 - 52008 (-)
Type: TC
Location: 51073 - 52008 (-)
Gene ID: k141_40458_46
Type: TC
Location: 52009 - 53076 (-)
Type: TC
Location: 52009 - 53076 (-)
Gene ID: k141_40458_47
Type: TC
Location: 53069 - 54613 (-)
Type: TC
Location: 53069 - 54613 (-)
Gene ID: k141_40458_48
Type: pfam
Location: 54634 - 56358 (-)
Type: pfam
Location: 54634 - 56358 (-)
Gene ID: k141_40458_49
Type: TC
Location: 56408 - 57529 (-)
Type: TC
Location: 56408 - 57529 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Caccovicinus
Species
Caccovicinus merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.