Cluster: CGMR066001_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR066001
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_34029 | k141_34029_51 | 59553 | 60641 | + | GT28 |
| STP | k141_34029 | k141_34029_52 | 60667 | 61197 | - | Sigma70_r2 | Sigma70_r4_2 |
| pfam | k141_34029 | k141_34029_53 | 61221 | 61637 | - | HIT | DcpS_C |
| TC | k141_34029 | k141_34029_54 | 61670 | 62284 | - | 9.B.104.1.3 |
Gene ID: k141_34029_51
Type: CAZyme
Location: 59553 - 60641 (+)
Type: CAZyme
Location: 59553 - 60641 (+)
Gene ID: k141_34029_52
Type: STP
Location: 60667 - 61197 (-)
Type: STP
Location: 60667 - 61197 (-)
Gene ID: k141_34029_53
Type: pfam
Location: 61221 - 61637 (-)
Type: pfam
Location: 61221 - 61637 (-)
Gene ID: k141_34029_54
Type: TC
Location: 61670 - 62284 (-)
Type: TC
Location: 61670 - 62284 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Caccovicinus
Species
Caccovicinus merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.