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Cluster: CGMR066001_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_45797 k141_45797_12 9411 10523 + 2.A.45.2.6
TC k141_45797 k141_45797_13 10578 12485 - 3.A.3.6.16
pfam k141_45797 k141_45797_14 12644 12919 - Trns_repr_metal
TC k141_45797 k141_45797_15 13005 13619 - 2.A.115.2.14
CAZyme k141_45797 k141_45797_16 13787 14983 - GH88
TF k141_45797 k141_45797_17 15261 16085 + HTH_AraC
STP k141_45797 k141_45797_18 16213 17622 + SBP_bac_1
TC k141_45797 k141_45797_19 17726 18616 + 3.A.1.1.28
TC k141_45797 k141_45797_20 18616 19452 + 3.A.1.1.45
TC k141_45797 k141_45797_21 19661 21517 + 8.A.59.2.1
Gene ID: k141_45797_12
Type: TC
Location: 9411 - 10523 (+)
Gene ID: k141_45797_13
Type: TC
Location: 10578 - 12485 (-)
Gene ID: k141_45797_14
Type: pfam
Location: 12644 - 12919 (-)
Gene ID: k141_45797_15
Type: TC
Location: 13005 - 13619 (-)
Gene ID: k141_45797_16
Type: CAZyme
Location: 13787 - 14983 (-)
Gene ID: k141_45797_17
Type: TF
Location: 15261 - 16085 (+)
Gene ID: k141_45797_18
Type: STP
Location: 16213 - 17622 (+)
Gene ID: k141_45797_19
Type: TC
Location: 17726 - 18616 (+)
Gene ID: k141_45797_20
Type: TC
Location: 18616 - 19452 (+)
Gene ID: k141_45797_21
Type: TC
Location: 19661 - 21517 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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