Cluster: CGMR065855_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR065855
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_127205 | k141_127205_8 | 6384 | 7976 | + | AA3_2 |
| TC | k141_127205 | k141_127205_9 | 7978 | 9192 | - | 9.B.34.1.3 |
| pfam | k141_127205 | k141_127205_10 | 9202 | 10695 | - | PNP_UDP_1 | AMNp_N |
| STP | k141_127205 | k141_127205_11 | 10699 | 12777 | - | EAL | GGDEF | PAS |
| TC | k141_127205 | k141_127205_12 | 12938 | 13912 | + | 2.A.4.7.7 |
Gene ID: k141_127205_8
Type: CAZyme
Location: 6384 - 7976 (+)
Type: CAZyme
Location: 6384 - 7976 (+)
Gene ID: k141_127205_9
Type: TC
Location: 7978 - 9192 (-)
Type: TC
Location: 7978 - 9192 (-)
Gene ID: k141_127205_10
Type: pfam
Location: 9202 - 10695 (-)
Type: pfam
Location: 9202 - 10695 (-)
Gene ID: k141_127205_11
Type: STP
Location: 10699 - 12777 (-)
Type: STP
Location: 10699 - 12777 (-)
Gene ID: k141_127205_12
Type: TC
Location: 12938 - 13912 (+)
Type: TC
Location: 12938 - 13912 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Comamonas
Species
Comamonas thiooxydans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.