Cluster: CGMR065684_CGC7
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR065684
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_13054 | k141_13054_97 | 103257 | 104237 | + | 2.A.7.3.62 |
| CAZyme | k141_13054 | k141_13054_98 | 104359 | 105789 | + | GH1 |
| TC | k141_13054 | k141_13054_99 | 105821 | 107269 | + | 4.A.1.2.6 |
Gene ID: k141_13054_97
Type: TC
Location: 103257 - 104237 (+)
Type: TC
Location: 103257 - 104237 (+)
Gene ID: k141_13054_98
Type: CAZyme
Location: 104359 - 105789 (+)
Type: CAZyme
Location: 104359 - 105789 (+)
Gene ID: k141_13054_99
Type: TC
Location: 105821 - 107269 (+)
Type: TC
Location: 105821 - 107269 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp905215385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_13054_98 | vegan > omnivore | 1.17225 | 0.00701 |
| k141_13054_99 | vegan > omnivore | 1.48841 | 0.00701 |