Cluster: CGMR065684_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR065684
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_11376 | k141_11376_19 | 22058 | 23440 | - | GH4 |
| TC | k141_11376 | k141_11376_20 | 23444 | 25060 | - | 4.A.1.1.3 |
| pfam | k141_11376 | k141_11376_21 | 25160 | 26026 | - | PRD | PRD | CAT_RBD |
| TC | k141_11376 | k141_11376_22 | 26033 | 26545 | - | 4.A.1.2.5 |
| STP | k141_11376 | k141_11376_23 | 26826 | 27587 | - | Fer4 |
| TC | k141_11376 | k141_11376_24 | 28214 | 30457 | - | 1.I.1.1.3 |
| TC | k141_11376 | k141_11376_25 | 31018 | 33357 | + | 3.A.3.5.15 |
Gene ID: k141_11376_19
Type: CAZyme
Location: 22058 - 23440 (-)
Type: CAZyme
Location: 22058 - 23440 (-)
Gene ID: k141_11376_20
Type: TC
Location: 23444 - 25060 (-)
Type: TC
Location: 23444 - 25060 (-)
Gene ID: k141_11376_21
Type: pfam
Location: 25160 - 26026 (-)
Type: pfam
Location: 25160 - 26026 (-)
Gene ID: k141_11376_22
Type: TC
Location: 26033 - 26545 (-)
Type: TC
Location: 26033 - 26545 (-)
Gene ID: k141_11376_23
Type: STP
Location: 26826 - 27587 (-)
Type: STP
Location: 26826 - 27587 (-)
Gene ID: k141_11376_24
Type: TC
Location: 28214 - 30457 (-)
Type: TC
Location: 28214 - 30457 (-)
Gene ID: k141_11376_25
Type: TC
Location: 31018 - 33357 (+)
Type: TC
Location: 31018 - 33357 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp905215385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.