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Cluster: CGMR065684_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_74549 k141_74549_6 3395 4564 - CE9
STP k141_74549 k141_74549_7 4684 5850 - SIS | SIS
TF k141_74549 k141_74549_8 5965 6696 - GntR
TC k141_74549 k141_74549_9 6882 7964 - 4.A.6.1.4
TC k141_74549 k141_74549_10 7954 8754 - 4.A.6.1.4
TC k141_74549 k141_74549_11 8845 9327 - 4.A.6.1.4
pfam k141_74549 k141_74549_12 9364 9645 - YajC
TC k141_74549 k141_74549_13 9645 10088 - 4.A.6.1.16
Gene ID: k141_74549_6
Type: CAZyme
Location: 3395 - 4564 (-)
Gene ID: k141_74549_7
Type: STP
Location: 4684 - 5850 (-)
Gene ID: k141_74549_8
Type: TF
Location: 5965 - 6696 (-)
Gene ID: k141_74549_9
Type: TC
Location: 6882 - 7964 (-)
Gene ID: k141_74549_10
Type: TC
Location: 7954 - 8754 (-)
Gene ID: k141_74549_11
Type: TC
Location: 8845 - 9327 (-)
Gene ID: k141_74549_12
Type: pfam
Location: 9364 - 9645 (-)
Gene ID: k141_74549_13
Type: TC
Location: 9645 - 10088 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_74549_12 vegan > omnivore 1.10056 0.00701

🧭 Explore Read Mapping of CGC

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