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Cluster: CGMR065637_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_368991 k141_368991_2 784 2706 - 2.A.16.2.2
pfam k141_368991 k141_368991_3 2747 4471 - DHH | DHHA1 | RecJ_OB
pfam k141_368991 k141_368991_4 4866 5930 + tRNA_Me_trans | tRNA_Me_trans_C | tRNA_Me_trans_M
TC k141_368991 k141_368991_5 5995 6642 + 1.A.62.2.1
pfam k141_368991 k141_368991_6 6871 8178 + Arf | Ras | MMR_HSR1 | GTP-bdg_N | GTP-bdg_M
pfam k141_368991 k141_368991_7 8430 9809 + Beta_elim_lyase
CAZyme k141_368991 k141_368991_8 9913 12480 - GT35
CAZyme k141_368991 k141_368991_9 12605 14293 - GT3
Gene ID: k141_368991_2
Type: TC
Location: 784 - 2706 (-)
Gene ID: k141_368991_3
Type: pfam
Location: 2747 - 4471 (-)
Gene ID: k141_368991_4
Type: pfam
Location: 4866 - 5930 (+)
Gene ID: k141_368991_5
Type: TC
Location: 5995 - 6642 (+)
Gene ID: k141_368991_6
Type: pfam
Location: 6871 - 8178 (+)
Gene ID: k141_368991_7
Type: pfam
Location: 8430 - 9809 (+)
Gene ID: k141_368991_8
Type: CAZyme
Location: 9913 - 12480 (-)
Gene ID: k141_368991_9
Type: CAZyme
Location: 12605 - 14293 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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