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Cluster: CGMR065274_CGC51

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_11540 k141_11540_23 21809 23566 - 3.A.1.135.7
TC k141_11540 k141_11540_24 23563 25296 - 3.A.1.135.7
pfam k141_11540 k141_11540_25 25704 25916 + RpoY
pfam k141_11540 k141_11540_26 25919 27598 + Lactamase_B | RMMBL | Lactamase_B_2 | RNase_J_C | RNase_J_b_CASP
CAZyme k141_11540 k141_11540_27 27840 30902 - GH38
STP k141_11540 k141_11540_28 30959 32500 - SBP_bac_1
pfam k141_11540 k141_11540_29 32541 33143 - DUF624
TC k141_11540 k141_11540_30 33156 34049 - 3.A.1.1.10
TC k141_11540 k141_11540_31 34061 35023 - 3.A.1.1.10
Gene ID: k141_11540_23
Type: TC
Location: 21809 - 23566 (-)
Gene ID: k141_11540_24
Type: TC
Location: 23563 - 25296 (-)
Gene ID: k141_11540_25
Type: pfam
Location: 25704 - 25916 (+)
Gene ID: k141_11540_26
Type: pfam
Location: 25919 - 27598 (+)
Gene ID: k141_11540_27
Type: CAZyme
Location: 27840 - 30902 (-)
Gene ID: k141_11540_28
Type: STP
Location: 30959 - 32500 (-)
Gene ID: k141_11540_29
Type: pfam
Location: 32541 - 33143 (-)
Gene ID: k141_11540_30
Type: TC
Location: 33156 - 34049 (-)
Gene ID: k141_11540_31
Type: TC
Location: 34061 - 35023 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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