Cluster: CGMR065274_CGC47
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR065274
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_592 | k141_592_64 | 57895 | 59610 | + | 3.A.1.135.7 |
| TC | k141_592 | k141_592_65 | 59603 | 61372 | + | 3.A.1.135.5 |
| CAZyme | k141_592 | k141_592_66 | 61669 | 63105 | + | GH1 |
| TC | k141_592 | k141_592_67 | 63290 | 65749 | + | 3.A.3.5.15 |
| STP | k141_592 | k141_592_68 | 65780 | 65980 | + | HMA |
| TF | k141_592 | k141_592_69 | 66139 | 66855 | - | GntR |
| TC | k141_592 | k141_592_70 | 66969 | 68240 | - | 4.A.3.2.8 |
| CAZyme | k141_592 | k141_592_71 | 68398 | 69786 | + | GH1 |
| TC | k141_592 | k141_592_72 | 69986 | 71266 | + | 4.A.3.2.2 |
| TF | k141_592 | k141_592_73 | 71442 | 72182 | + | GntR |
| CAZyme | k141_592 | k141_592_74 | 72328 | 73164 | + | GT8 |
| TC | k141_592 | k141_592_75 | 73330 | 73797 | + | 9.A.24.1.7 |
| peptidase | k141_592 | k141_592_76 | 73840 | 75645 | - | M03.A08 |
| pfam | k141_592 | k141_592_77 | 75756 | 76268 | + | VanZ |
| TC | k141_592 | k141_592_78 | 76348 | 77058 | + | 9.B.143.2.3 |
Gene ID: k141_592_64
Type: TC
Location: 57895 - 59610 (+)
Type: TC
Location: 57895 - 59610 (+)
Gene ID: k141_592_65
Type: TC
Location: 59603 - 61372 (+)
Type: TC
Location: 59603 - 61372 (+)
Gene ID: k141_592_66
Type: CAZyme
Location: 61669 - 63105 (+)
Type: CAZyme
Location: 61669 - 63105 (+)
Gene ID: k141_592_67
Type: TC
Location: 63290 - 65749 (+)
Type: TC
Location: 63290 - 65749 (+)
Gene ID: k141_592_68
Type: STP
Location: 65780 - 65980 (+)
Type: STP
Location: 65780 - 65980 (+)
Gene ID: k141_592_69
Type: TF
Location: 66139 - 66855 (-)
Type: TF
Location: 66139 - 66855 (-)
Gene ID: k141_592_70
Type: TC
Location: 66969 - 68240 (-)
Type: TC
Location: 66969 - 68240 (-)
Gene ID: k141_592_71
Type: CAZyme
Location: 68398 - 69786 (+)
Type: CAZyme
Location: 68398 - 69786 (+)
Gene ID: k141_592_72
Type: TC
Location: 69986 - 71266 (+)
Type: TC
Location: 69986 - 71266 (+)
Gene ID: k141_592_73
Type: TF
Location: 71442 - 72182 (+)
Type: TF
Location: 71442 - 72182 (+)
Gene ID: k141_592_74
Type: CAZyme
Location: 72328 - 73164 (+)
Type: CAZyme
Location: 72328 - 73164 (+)
Gene ID: k141_592_75
Type: TC
Location: 73330 - 73797 (+)
Type: TC
Location: 73330 - 73797 (+)
Gene ID: k141_592_76
Type: peptidase
Location: 73840 - 75645 (-)
Type: peptidase
Location: 73840 - 75645 (-)
Gene ID: k141_592_77
Type: pfam
Location: 75756 - 76268 (+)
Type: pfam
Location: 75756 - 76268 (+)
Gene ID: k141_592_78
Type: TC
Location: 76348 - 77058 (+)
Type: TC
Location: 76348 - 77058 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_D
Species
Enterococcus_D gallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.