Cluster: CGMR065274_CGC46
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR065274
- CGC Family ID: CGCFAM_00680
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_592 | k141_592_1 | 2 | 352 | + | CBM50 |
| TF | k141_592 | k141_592_2 | 607 | 1488 | + | HTH_AraC | HTH_AraC |
| STP | k141_592 | k141_592_3 | 1699 | 3030 | + | SBP_bac_1 |
| TC | k141_592 | k141_592_4 | 3172 | 4062 | + | 3.A.1.1.11 |
| TC | k141_592 | k141_592_5 | 4075 | 4932 | + | 3.A.1.1.11 |
| pfam | k141_592 | k141_592_6 | 4937 | 5350 | + | RDD |
| CAZyme | k141_592 | k141_592_7 | 5338 | 6492 | + | GH105 |
Gene ID: k141_592_1
Type: CAZyme
Location: 2 - 352 (+)
Type: CAZyme
Location: 2 - 352 (+)
Gene ID: k141_592_2
Type: TF
Location: 607 - 1488 (+)
Type: TF
Location: 607 - 1488 (+)
Gene ID: k141_592_3
Type: STP
Location: 1699 - 3030 (+)
Type: STP
Location: 1699 - 3030 (+)
Gene ID: k141_592_4
Type: TC
Location: 3172 - 4062 (+)
Type: TC
Location: 3172 - 4062 (+)
Gene ID: k141_592_5
Type: TC
Location: 4075 - 4932 (+)
Type: TC
Location: 4075 - 4932 (+)
Gene ID: k141_592_6
Type: pfam
Location: 4937 - 5350 (+)
Type: pfam
Location: 4937 - 5350 (+)
Gene ID: k141_592_7
Type: CAZyme
Location: 5338 - 6492 (+)
Type: CAZyme
Location: 5338 - 6492 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_D
Species
Enterococcus_D gallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.