Cluster: CGMR065274_CGC39
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 7
- Substrate:
- Genome ID: CGMR065274
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_22397 | k141_22397_159 | 165142 | 166305 | + | 2.A.86.1.8 |
| pfam | k141_22397 | k141_22397_160 | 166534 | 167433 | + | ROK |
| TF | k141_22397 | k141_22397_161 | 167540 | 169792 | + | HTH_AraC | HTH_AraC |
| CAZyme | k141_22397 | k141_22397_162 | 169822 | 171114 | + | GH20 |
| CAZyme | k141_22397 | k141_22397_163 | 171348 | 172646 | - | GH29 |
| NULL(UNKNOWN) | k141_22397 | k141_22397_164 | 172658 | 173143 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_22397 | k141_22397_165 | 173191 | 175053 | - | GH20 |
| pfam | k141_22397 | k141_22397_166 | 175082 | 175708 | - | DUF624 |
| CAZyme | k141_22397 | k141_22397_167 | 176198 | 177541 | + | GH29 |
| TC | k141_22397 | k141_22397_168 | 177620 | 178573 | + | 3.A.1.1.10 |
| TC | k141_22397 | k141_22397_169 | 178589 | 179503 | + | 3.A.1.1.10 |
| TC | k141_22397 | k141_22397_170 | 179523 | 181172 | + | 3.A.1.1.10 |
| CAZyme | k141_22397 | k141_22397_171 | 181263 | 184289 | + | GH38 |
| CAZyme | k141_22397 | k141_22397_172 | 184318 | 186555 | + | GH3 |
| CAZyme | k141_22397 | k141_22397_173 | 186549 | 187943 | + | GH1 |
Gene ID: k141_22397_159
Type: TC
Location: 165142 - 166305 (+)
Type: TC
Location: 165142 - 166305 (+)
Gene ID: k141_22397_160
Type: pfam
Location: 166534 - 167433 (+)
Type: pfam
Location: 166534 - 167433 (+)
Gene ID: k141_22397_161
Type: TF
Location: 167540 - 169792 (+)
Type: TF
Location: 167540 - 169792 (+)
Gene ID: k141_22397_162
Type: CAZyme
Location: 169822 - 171114 (+)
Type: CAZyme
Location: 169822 - 171114 (+)
Gene ID: k141_22397_163
Type: CAZyme
Location: 171348 - 172646 (-)
Type: CAZyme
Location: 171348 - 172646 (-)
Gene ID: k141_22397_164
Type:
Location: 172658 - 173143 (-)
Type:
Location: 172658 - 173143 (-)
Gene ID: k141_22397_165
Type: CAZyme
Location: 173191 - 175053 (-)
Type: CAZyme
Location: 173191 - 175053 (-)
Gene ID: k141_22397_166
Type: pfam
Location: 175082 - 175708 (-)
Type: pfam
Location: 175082 - 175708 (-)
Gene ID: k141_22397_167
Type: CAZyme
Location: 176198 - 177541 (+)
Type: CAZyme
Location: 176198 - 177541 (+)
Gene ID: k141_22397_168
Type: TC
Location: 177620 - 178573 (+)
Type: TC
Location: 177620 - 178573 (+)
Gene ID: k141_22397_169
Type: TC
Location: 178589 - 179503 (+)
Type: TC
Location: 178589 - 179503 (+)
Gene ID: k141_22397_170
Type: TC
Location: 179523 - 181172 (+)
Type: TC
Location: 179523 - 181172 (+)
Gene ID: k141_22397_171
Type: CAZyme
Location: 181263 - 184289 (+)
Type: CAZyme
Location: 181263 - 184289 (+)
Gene ID: k141_22397_172
Type: CAZyme
Location: 184318 - 186555 (+)
Type: CAZyme
Location: 184318 - 186555 (+)
Gene ID: k141_22397_173
Type: CAZyme
Location: 186549 - 187943 (+)
Type: CAZyme
Location: 186549 - 187943 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_D
Species
Enterococcus_D gallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.