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Cluster: CGMR065274_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_870 k141_870_3 366 1292 - 9.B.97.5.1
TC k141_870 k141_870_4 1310 1969 - 9.B.97.5.1
NULL(UNKNOWN) k141_870 k141_870_5 1972 2250 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_870 k141_870_6 2247 2564 - CE4
NULL(UNKNOWN) k141_870 k141_870_7 2561 2818 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_870 k141_870_8 2815 3717 - LytR_cpsA_psr
TC k141_870 k141_870_9 4093 5259 + 3.A.1.12.4
TC k141_870 k141_870_10 5262 5897 + 3.A.1.12.4
TC k141_870 k141_870_11 5898 6818 + 3.A.1.12.4
TC k141_870 k141_870_12 6823 7485 + 3.A.1.12.4
CAZyme k141_870 k141_870_13 7813 9030 - GH43_4
pfam k141_870 k141_870_14 9238 9498 - DUF6171
CAZyme k141_870 k141_870_15 9503 10948 - GH51_1
CAZyme k141_870 k141_870_16 10959 12581 - GH43_4
CAZyme k141_870 k141_870_17 12596 13552 - GH43_26
NULL(UNKNOWN) k141_870 k141_870_18 13568 13984 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_870 k141_870_19 13993 14844 - 3.A.1.1.20
TC k141_870 k141_870_20 14857 15738 - 3.A.1.1.23
STP k141_870 k141_870_21 15792 17042 - SBP_bac_1
TF k141_870 k141_870_22 17360 18250 + HTH_5
TC k141_870 k141_870_23 18389 20212 - 2.A.3.14.3
TC k141_870 k141_870_24 20434 23139 - 9.B.74.1.1
Gene ID: k141_870_3
Type: TC
Location: 366 - 1292 (-)
Gene ID: k141_870_4
Type: TC
Location: 1310 - 1969 (-)
Gene ID: k141_870_5
Type:
Location: 1972 - 2250 (-)
Gene ID: k141_870_6
Type: CAZyme
Location: 2247 - 2564 (-)
Gene ID: k141_870_7
Type:
Location: 2561 - 2818 (-)
Gene ID: k141_870_8
Type: pfam
Location: 2815 - 3717 (-)
Gene ID: k141_870_9
Type: TC
Location: 4093 - 5259 (+)
Gene ID: k141_870_10
Type: TC
Location: 5262 - 5897 (+)
Gene ID: k141_870_11
Type: TC
Location: 5898 - 6818 (+)
Gene ID: k141_870_12
Type: TC
Location: 6823 - 7485 (+)
Gene ID: k141_870_13
Type: CAZyme
Location: 7813 - 9030 (-)
Gene ID: k141_870_14
Type: pfam
Location: 9238 - 9498 (-)
Gene ID: k141_870_15
Type: CAZyme
Location: 9503 - 10948 (-)
Gene ID: k141_870_16
Type: CAZyme
Location: 10959 - 12581 (-)
Gene ID: k141_870_17
Type: CAZyme
Location: 12596 - 13552 (-)
Gene ID: k141_870_18
Type:
Location: 13568 - 13984 (-)
Gene ID: k141_870_19
Type: TC
Location: 13993 - 14844 (-)
Gene ID: k141_870_20
Type: TC
Location: 14857 - 15738 (-)
Gene ID: k141_870_21
Type: STP
Location: 15792 - 17042 (-)
Gene ID: k141_870_22
Type: TF
Location: 17360 - 18250 (+)
Gene ID: k141_870_23
Type: TC
Location: 18389 - 20212 (-)
Gene ID: k141_870_24
Type: TC
Location: 20434 - 23139 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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