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Cluster: CGMR065274_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_12426 k141_12426_79 87623 89368 - 8.A.59.2.1
pfam k141_12426 k141_12426_80 89361 89981 - DUF624
STP k141_12426 k141_12426_81 90178 91650 - SBP_bac_1
TC k141_12426 k141_12426_82 91673 92593 - 3.A.1.1.29
TC k141_12426 k141_12426_83 92607 93542 - 3.A.1.1.10
pfam k141_12426 k141_12426_84 93737 94594 - ROK
CAZyme k141_12426 k141_12426_85 94600 97284 - GH38
CAZyme k141_12426 k141_12426_86 97317 98606 - GH125
TF k141_12426 k141_12426_87 98761 99831 + GntR
CAZyme k141_12426 k141_12426_88 99850 102027 + GH92
Gene ID: k141_12426_79
Type: TC
Location: 87623 - 89368 (-)
Gene ID: k141_12426_80
Type: pfam
Location: 89361 - 89981 (-)
Gene ID: k141_12426_81
Type: STP
Location: 90178 - 91650 (-)
Gene ID: k141_12426_82
Type: TC
Location: 91673 - 92593 (-)
Gene ID: k141_12426_83
Type: TC
Location: 92607 - 93542 (-)
Gene ID: k141_12426_84
Type: pfam
Location: 93737 - 94594 (-)
Gene ID: k141_12426_85
Type: CAZyme
Location: 94600 - 97284 (-)
Gene ID: k141_12426_86
Type: CAZyme
Location: 97317 - 98606 (-)
Gene ID: k141_12426_87
Type: TF
Location: 98761 - 99831 (+)
Gene ID: k141_12426_88
Type: CAZyme
Location: 99850 - 102027 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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