Cluster: CGMR065274_CGC29
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR065274
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_9805 | k141_9805_16 | 16110 | 17090 | + | 3.A.1.5.9 |
| TC | k141_9805 | k141_9805_17 | 17087 | 17947 | + | 3.A.1.5.14 |
| TC | k141_9805 | k141_9805_18 | 17940 | 19100 | + | 3.A.1.5.9 |
| TC | k141_9805 | k141_9805_19 | 19084 | 20064 | + | 3.A.1.5.35 |
| pfam | k141_9805 | k141_9805_20 | 20430 | 20846 | + | EIIA-man |
| TC | k141_9805 | k141_9805_21 | 20843 | 21394 | + | 4.A.6.1.19 |
| TF | k141_9805 | k141_9805_22 | 21547 | 22542 | - | LacI |
| pfam | k141_9805 | k141_9805_23 | 22722 | 24041 | + | SBP_bac_1 | SBP_bac_8 |
| TC | k141_9805 | k141_9805_24 | 24041 | 24916 | + | 3.A.1.1.3 |
| TC | k141_9805 | k141_9805_25 | 24903 | 25739 | + | 3.A.1.1.39 |
| CAZyme | k141_9805 | k141_9805_26 | 25752 | 27260 | + | GH13_23 |
| CAZyme | k141_9805 | k141_9805_27 | 27257 | 28162 | + | GT108 |
| CAZyme | k141_9805 | k141_9805_28 | 28174 | 29241 | + | GH130_4 |
| pfam | k141_9805 | k141_9805_29 | 29238 | 30941 | + | PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| TC | k141_9805 | k141_9805_30 | 31028 | 32653 | - | 3.A.1.111.4 |
Gene ID: k141_9805_16
Type: TC
Location: 16110 - 17090 (+)
Type: TC
Location: 16110 - 17090 (+)
Gene ID: k141_9805_17
Type: TC
Location: 17087 - 17947 (+)
Type: TC
Location: 17087 - 17947 (+)
Gene ID: k141_9805_18
Type: TC
Location: 17940 - 19100 (+)
Type: TC
Location: 17940 - 19100 (+)
Gene ID: k141_9805_19
Type: TC
Location: 19084 - 20064 (+)
Type: TC
Location: 19084 - 20064 (+)
Gene ID: k141_9805_20
Type: pfam
Location: 20430 - 20846 (+)
Type: pfam
Location: 20430 - 20846 (+)
Gene ID: k141_9805_21
Type: TC
Location: 20843 - 21394 (+)
Type: TC
Location: 20843 - 21394 (+)
Gene ID: k141_9805_22
Type: TF
Location: 21547 - 22542 (-)
Type: TF
Location: 21547 - 22542 (-)
Gene ID: k141_9805_23
Type: pfam
Location: 22722 - 24041 (+)
Type: pfam
Location: 22722 - 24041 (+)
Gene ID: k141_9805_24
Type: TC
Location: 24041 - 24916 (+)
Type: TC
Location: 24041 - 24916 (+)
Gene ID: k141_9805_25
Type: TC
Location: 24903 - 25739 (+)
Type: TC
Location: 24903 - 25739 (+)
Gene ID: k141_9805_26
Type: CAZyme
Location: 25752 - 27260 (+)
Type: CAZyme
Location: 25752 - 27260 (+)
Gene ID: k141_9805_27
Type: CAZyme
Location: 27257 - 28162 (+)
Type: CAZyme
Location: 27257 - 28162 (+)
Gene ID: k141_9805_28
Type: CAZyme
Location: 28174 - 29241 (+)
Type: CAZyme
Location: 28174 - 29241 (+)
Gene ID: k141_9805_29
Type: pfam
Location: 29238 - 30941 (+)
Type: pfam
Location: 29238 - 30941 (+)
Gene ID: k141_9805_30
Type: TC
Location: 31028 - 32653 (-)
Type: TC
Location: 31028 - 32653 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_D
Species
Enterococcus_D gallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.