dbCAN Logo

Cluster: CGMR065274_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_23519 k141_23519_136 135141 136049 + 3.A.1.131.1
pfam k141_23519 k141_23519_137 136051 136854 + ABC2_membrane_2 | ABC2_membrane_4
pfam k141_23519 k141_23519_138 136962 137180 + UPF0154
TC k141_23519 k141_23519_139 137660 139411 + 3.A.1.106.8
TC k141_23519 k141_23519_140 139411 141192 + 3.A.1.106.8
pfam k141_23519 k141_23519_141 141608 142450 + PRD | PRD | CAT_RBD
TC k141_23519 k141_23519_142 142565 144484 + 4.A.1.2.6
TF k141_23519 k141_23519_143 144560 145480 - HTH_6
CAZyme k141_23519 k141_23519_144 145741 147117 + GH4
CAZyme k141_23519 k141_23519_145 147151 148584 + GH1
CAZyme k141_23519 k141_23519_146 148659 150116 + GH1
Gene ID: k141_23519_136
Type: TC
Location: 135141 - 136049 (+)
Gene ID: k141_23519_137
Type: pfam
Location: 136051 - 136854 (+)
Gene ID: k141_23519_138
Type: pfam
Location: 136962 - 137180 (+)
Gene ID: k141_23519_139
Type: TC
Location: 137660 - 139411 (+)
Gene ID: k141_23519_140
Type: TC
Location: 139411 - 141192 (+)
Gene ID: k141_23519_141
Type: pfam
Location: 141608 - 142450 (+)
Gene ID: k141_23519_142
Type: TC
Location: 142565 - 144484 (+)
Gene ID: k141_23519_143
Type: TF
Location: 144560 - 145480 (-)
Gene ID: k141_23519_144
Type: CAZyme
Location: 145741 - 147117 (+)
Gene ID: k141_23519_145
Type: CAZyme
Location: 147151 - 148584 (+)
Gene ID: k141_23519_146
Type: CAZyme
Location: 148659 - 150116 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List