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Cluster: CGMR065274_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_4955 k141_4955_14 10663 11370 + 3.A.1.122.4
TC k141_4955 k141_4955_15 11468 13333 - 4.A.1.2.2
pfam k141_4955 k141_4955_16 13471 14310 - PRD | PRD | CAT_RBD
TC k141_4955 k141_4955_17 14592 15467 - 2.A.7.7.2
TF k141_4955 k141_4955_18 15731 16537 - HTH_6
pfam k141_4955 k141_4955_19 16599 17480 - BcrAD_BadFG
TC k141_4955 k141_4955_20 17762 18082 - 4.A.3.2.2
NULL(UNKNOWN) k141_4955 k141_4955_21 18121 18393 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_4955 k141_4955_22 18390 19652 - 4.A.3.2.6
pfam k141_4955 k141_4955_23 19669 19977 - PTS_IIB
CAZyme k141_4955 k141_4955_24 19983 21419 - GH1
TC k141_4955 k141_4955_25 21597 23018 - 2.A.1.3.39
TF k141_4955 k141_4955_26 23002 23457 - MarR
pfam k141_4955 k141_4955_27 23606 24619 - Dus
TC k141_4955 k141_4955_28 24731 25906 - 2.A.1.2.97
Gene ID: k141_4955_14
Type: TC
Location: 10663 - 11370 (+)
Gene ID: k141_4955_15
Type: TC
Location: 11468 - 13333 (-)
Gene ID: k141_4955_16
Type: pfam
Location: 13471 - 14310 (-)
Gene ID: k141_4955_17
Type: TC
Location: 14592 - 15467 (-)
Gene ID: k141_4955_18
Type: TF
Location: 15731 - 16537 (-)
Gene ID: k141_4955_19
Type: pfam
Location: 16599 - 17480 (-)
Gene ID: k141_4955_20
Type: TC
Location: 17762 - 18082 (-)
Gene ID: k141_4955_21
Type:
Location: 18121 - 18393 (-)
Gene ID: k141_4955_22
Type: TC
Location: 18390 - 19652 (-)
Gene ID: k141_4955_23
Type: pfam
Location: 19669 - 19977 (-)
Gene ID: k141_4955_24
Type: CAZyme
Location: 19983 - 21419 (-)
Gene ID: k141_4955_25
Type: TC
Location: 21597 - 23018 (-)
Gene ID: k141_4955_26
Type: TF
Location: 23002 - 23457 (-)
Gene ID: k141_4955_27
Type: pfam
Location: 23606 - 24619 (-)
Gene ID: k141_4955_28
Type: TC
Location: 24731 - 25906 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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