Cluster: CGMR065274_CGC10
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR065274
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_12426 | k141_12426_305 | 343154 | 344572 | - | 2.A.3.7.7 |
| pfam | k141_12426 | k141_12426_306 | 344796 | 345824 | - | OTCace | OTCace_N |
| TF | k141_12426 | k141_12426_307 | 346095 | 347030 | + | GerE |
| TC | k141_12426 | k141_12426_308 | 347101 | 348744 | - | 3.A.1.5.19 |
| pfam | k141_12426 | k141_12426_309 | 348779 | 350200 | - | Transglut_core |
| pfam | k141_12426 | k141_12426_310 | 350203 | 351285 | - | MR_MLE_N | MAAL_C | MR_MLE_C |
| CAZyme | k141_12426 | k141_12426_311 | 351457 | 353250 | - | GH2 |
| TC | k141_12426 | k141_12426_312 | 353292 | 354122 | - | 3.A.1.1.11 |
| TC | k141_12426 | k141_12426_313 | 354119 | 355048 | - | 3.A.1.1.11 |
| STP | k141_12426 | k141_12426_314 | 355061 | 356434 | - | SBP_bac_1 |
| TF | k141_12426 | k141_12426_315 | 356751 | 357623 | + | HTH_AraC | HTH_AraC |
| TC | k141_12426 | k141_12426_316 | 358021 | 359856 | - | 4.A.1.2.11 |
| CAZyme | k141_12426 | k141_12426_317 | 360092 | 361534 | - | GH1 |
| TF | k141_12426 | k141_12426_318 | 361539 | 362330 | - | HTH_6 |
| CAZyme | k141_12426 | k141_12426_319 | 362713 | 364851 | - | GH65 |
| peptidase | k141_12426 | k141_12426_320 | 365005 | 366219 | + | M38.UNW |
| NULL(UNKNOWN) | k141_12426 | k141_12426_321 | 366227 | 366385 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_12426 | k141_12426_322 | 366399 | 367286 | - | 3.A.1.1.20 |
Gene ID: k141_12426_305
Type: TC
Location: 343154 - 344572 (-)
Type: TC
Location: 343154 - 344572 (-)
Gene ID: k141_12426_306
Type: pfam
Location: 344796 - 345824 (-)
Type: pfam
Location: 344796 - 345824 (-)
Gene ID: k141_12426_307
Type: TF
Location: 346095 - 347030 (+)
Type: TF
Location: 346095 - 347030 (+)
Gene ID: k141_12426_308
Type: TC
Location: 347101 - 348744 (-)
Type: TC
Location: 347101 - 348744 (-)
Gene ID: k141_12426_309
Type: pfam
Location: 348779 - 350200 (-)
Type: pfam
Location: 348779 - 350200 (-)
Gene ID: k141_12426_310
Type: pfam
Location: 350203 - 351285 (-)
Type: pfam
Location: 350203 - 351285 (-)
Gene ID: k141_12426_311
Type: CAZyme
Location: 351457 - 353250 (-)
Type: CAZyme
Location: 351457 - 353250 (-)
Gene ID: k141_12426_312
Type: TC
Location: 353292 - 354122 (-)
Type: TC
Location: 353292 - 354122 (-)
Gene ID: k141_12426_313
Type: TC
Location: 354119 - 355048 (-)
Type: TC
Location: 354119 - 355048 (-)
Gene ID: k141_12426_314
Type: STP
Location: 355061 - 356434 (-)
Type: STP
Location: 355061 - 356434 (-)
Gene ID: k141_12426_315
Type: TF
Location: 356751 - 357623 (+)
Type: TF
Location: 356751 - 357623 (+)
Gene ID: k141_12426_316
Type: TC
Location: 358021 - 359856 (-)
Type: TC
Location: 358021 - 359856 (-)
Gene ID: k141_12426_317
Type: CAZyme
Location: 360092 - 361534 (-)
Type: CAZyme
Location: 360092 - 361534 (-)
Gene ID: k141_12426_318
Type: TF
Location: 361539 - 362330 (-)
Type: TF
Location: 361539 - 362330 (-)
Gene ID: k141_12426_319
Type: CAZyme
Location: 362713 - 364851 (-)
Type: CAZyme
Location: 362713 - 364851 (-)
Gene ID: k141_12426_320
Type: peptidase
Location: 365005 - 366219 (+)
Type: peptidase
Location: 365005 - 366219 (+)
Gene ID: k141_12426_321
Type:
Location: 366227 - 366385 (-)
Type:
Location: 366227 - 366385 (-)
Gene ID: k141_12426_322
Type: TC
Location: 366399 - 367286 (-)
Type: TC
Location: 366399 - 367286 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_D
Species
Enterococcus_D gallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.