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Cluster: CGMR065274_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_12426 k141_12426_37 36376 37788 - 2.A.3.2.11
pfam k141_12426 k141_12426_38 38349 39410 - LytR_cpsA_psr
TC k141_12426 k141_12426_39 39825 41549 + 3.A.1.135.5
TC k141_12426 k141_12426_40 41546 43300 + 3.A.1.135.5
pfam k141_12426 k141_12426_41 43379 43651 - Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10 | Acetyltransf_CG
CAZyme k141_12426 k141_12426_42 44234 46423 - GH36
TC k141_12426 k141_12426_43 46449 47270 - 3.A.1.1.4
TC k141_12426 k141_12426_44 47267 48142 - 3.A.1.1.4
TC k141_12426 k141_12426_45 48297 49583 - 3.A.1.1.4
TF k141_12426 k141_12426_46 49752 51269 + HTH_AraC | HTH_AraC
TC k141_12426 k141_12426_47 51266 52951 + 8.A.59.2.1
Gene ID: k141_12426_37
Type: TC
Location: 36376 - 37788 (-)
Gene ID: k141_12426_38
Type: pfam
Location: 38349 - 39410 (-)
Gene ID: k141_12426_39
Type: TC
Location: 39825 - 41549 (+)
Gene ID: k141_12426_40
Type: TC
Location: 41546 - 43300 (+)
Gene ID: k141_12426_41
Type: pfam
Location: 43379 - 43651 (-)
Gene ID: k141_12426_42
Type: CAZyme
Location: 44234 - 46423 (-)
Gene ID: k141_12426_43
Type: TC
Location: 46449 - 47270 (-)
Gene ID: k141_12426_44
Type: TC
Location: 47267 - 48142 (-)
Gene ID: k141_12426_45
Type: TC
Location: 48297 - 49583 (-)
Gene ID: k141_12426_46
Type: TF
Location: 49752 - 51269 (+)
Gene ID: k141_12426_47
Type: TC
Location: 51266 - 52951 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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