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Cluster: CGMR065185_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_28062 k141_28062_1 302 2233 - GH13_7 | GH13_7
pfam k141_28062 k141_28062_2 2361 3950 - SusE
pfam k141_28062 k141_28062_3 3966 5558 - SusD_RagB | SusD-like_3
TC k141_28062 k141_28062_4 5598 8597 - 1.B.14.6.1
pfam k141_28062 k141_28062_5 8825 10528 - DUF6377
NULL(UNKNOWN) k141_28062 k141_28062_6 11303 12064 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_28062 k141_28062_7 12076 13050 - 2.A.19.5.2
peptidase k141_28062 k141_28062_8 13136 14404 - M64.UPW
CAZyme k141_28062 k141_28062_9 14616 15620 + GH43_17
Gene ID: k141_28062_1
Type: CAZyme
Location: 302 - 2233 (-)
Gene ID: k141_28062_2
Type: pfam
Location: 2361 - 3950 (-)
Gene ID: k141_28062_3
Type: pfam
Location: 3966 - 5558 (-)
Gene ID: k141_28062_4
Type: TC
Location: 5598 - 8597 (-)
Gene ID: k141_28062_5
Type: pfam
Location: 8825 - 10528 (-)
Gene ID: k141_28062_6
Type:
Location: 11303 - 12064 (-)
Gene ID: k141_28062_7
Type: TC
Location: 12076 - 13050 (-)
Gene ID: k141_28062_8
Type: peptidase
Location: 13136 - 14404 (-)
Gene ID: k141_28062_9
Type: CAZyme
Location: 14616 - 15620 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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