Cluster: CGMR065185_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR065185
- CGC Family ID: CGCFAM_02230
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_43856 | k141_43856_52 | 47996 | 49579 | + | 3.D.10.1.4 |
| TC | k141_43856 | k141_43856_53 | 49579 | 51249 | + | 9.B.174.1.1 |
| pfam | k141_43856 | k141_43856_54 | 51300 | 54656 | + | DEAD | Helicase_C | CarD_TRCF_RID | TRCF | ResIII | UvrB_inter |
| TC | k141_43856 | k141_43856_55 | 54871 | 55311 | - | 1.A.22.1.1 |
| pfam | k141_43856 | k141_43856_56 | 55659 | 56666 | + | Gp_dh_N | Gp_dh_C |
| CAZyme | k141_43856 | k141_43856_57 | 56769 | 57815 | + | GH53 |
Gene ID: k141_43856_52
Type: TC
Location: 47996 - 49579 (+)
Type: TC
Location: 47996 - 49579 (+)
Gene ID: k141_43856_53
Type: TC
Location: 49579 - 51249 (+)
Type: TC
Location: 49579 - 51249 (+)
Gene ID: k141_43856_54
Type: pfam
Location: 51300 - 54656 (+)
Type: pfam
Location: 51300 - 54656 (+)
Gene ID: k141_43856_55
Type: TC
Location: 54871 - 55311 (-)
Type: TC
Location: 54871 - 55311 (-)
Gene ID: k141_43856_56
Type: pfam
Location: 55659 - 56666 (+)
Type: pfam
Location: 55659 - 56666 (+)
Gene ID: k141_43856_57
Type: CAZyme
Location: 56769 - 57815 (+)
Type: CAZyme
Location: 56769 - 57815 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella muris_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.