Cluster: CGMR065185_CGC29
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR065185
- CGC Family ID: CGCFAM_00165
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_82214 | k141_82214_12 | 11573 | 13348 | + | 3.A.1.120.6 |
| NULL(UNKNOWN) | k141_82214 | k141_82214_13 | 13403 | 14635 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_82214 | k141_82214_14 | 14937 | 16550 | - | 3.A.1.121.4 |
| pfam | k141_82214 | k141_82214_15 | 16560 | 17642 | - | PGA_cap |
| pfam | k141_82214 | k141_82214_16 | 17672 | 19093 | - | DUF4270 |
| CAZyme | k141_82214 | k141_82214_17 | 19083 | 19904 | - | GT5 |
| pfam | k141_82214 | k141_82214_18 | 20232 | 21095 | + | Pantoate_ligase |
| pfam | k141_82214 | k141_82214_19 | 21100 | 21447 | + | Asp_decarbox |
| TC | k141_82214 | k141_82214_20 | 21454 | 22797 | + | 3.A.5.1.1 |
| pfam | k141_82214 | k141_82214_21 | 22839 | 24461 | - | DUF6377 |
| TC | k141_82214 | k141_82214_22 | 24712 | 27702 | + | 1.B.14.6.1 |
| pfam | k141_82214 | k141_82214_23 | 27733 | 29460 | + | SusD_RagB | SusD-like_3 |
| pfam | k141_82214 | k141_82214_24 | 29480 | 29968 | + | SusF_SusE |
| CAZyme | k141_82214 | k141_82214_25 | 29965 | 32292 | + | GH27 |
Gene ID: k141_82214_12
Type: TC
Location: 11573 - 13348 (+)
Type: TC
Location: 11573 - 13348 (+)
Gene ID: k141_82214_13
Type:
Location: 13403 - 14635 (-)
Type:
Location: 13403 - 14635 (-)
Gene ID: k141_82214_14
Type: TC
Location: 14937 - 16550 (-)
Type: TC
Location: 14937 - 16550 (-)
Gene ID: k141_82214_15
Type: pfam
Location: 16560 - 17642 (-)
Type: pfam
Location: 16560 - 17642 (-)
Gene ID: k141_82214_16
Type: pfam
Location: 17672 - 19093 (-)
Type: pfam
Location: 17672 - 19093 (-)
Gene ID: k141_82214_17
Type: CAZyme
Location: 19083 - 19904 (-)
Type: CAZyme
Location: 19083 - 19904 (-)
Gene ID: k141_82214_18
Type: pfam
Location: 20232 - 21095 (+)
Type: pfam
Location: 20232 - 21095 (+)
Gene ID: k141_82214_19
Type: pfam
Location: 21100 - 21447 (+)
Type: pfam
Location: 21100 - 21447 (+)
Gene ID: k141_82214_20
Type: TC
Location: 21454 - 22797 (+)
Type: TC
Location: 21454 - 22797 (+)
Gene ID: k141_82214_21
Type: pfam
Location: 22839 - 24461 (-)
Type: pfam
Location: 22839 - 24461 (-)
Gene ID: k141_82214_22
Type: TC
Location: 24712 - 27702 (+)
Type: TC
Location: 24712 - 27702 (+)
Gene ID: k141_82214_23
Type: pfam
Location: 27733 - 29460 (+)
Type: pfam
Location: 27733 - 29460 (+)
Gene ID: k141_82214_24
Type: pfam
Location: 29480 - 29968 (+)
Type: pfam
Location: 29480 - 29968 (+)
Gene ID: k141_82214_25
Type: CAZyme
Location: 29965 - 32292 (+)
Type: CAZyme
Location: 29965 - 32292 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella muris_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.