Cluster: CGMR065185_CGC19
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 3
- Substrate: fructan
- Genome ID: CGMR065185
- CGC Family ID: CGCFAM_00017
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_23783 | k141_23783_6 | 3847 | 6474 | + | GH31_15 |
| peptidase | k141_23783 | k141_23783_7 | 6655 | 9183 | - | S08.UPA |
| pfam | k141_23783 | k141_23783_8 | 9224 | 10951 | - | SusD_RagB | SusD-like_3 |
| TC | k141_23783 | k141_23783_9 | 10964 | 14191 | - | 1.B.14.6.1 |
| STP | k141_23783 | k141_23783_10 | 14297 | 15247 | - | FecR |
| STP | k141_23783 | k141_23783_11 | 15303 | 15905 | - | Sigma70_r2 | Sigma70_r4_2 |
| CAZyme | k141_23783 | k141_23783_12 | 15921 | 18506 | - | GH31_15 |
| STP | k141_23783 | k141_23783_13 | 19510 | 20388 | - | PfkB |
| TC | k141_23783 | k141_23783_14 | 20488 | 21675 | - | 2.A.1.7.17 |
| CAZyme | k141_23783 | k141_23783_15 | 21690 | 23519 | - | GH32 |
| TF | k141_23783 | k141_23783_16 | 23826 | 26573 | + | HTH_AraC |
| TC | k141_23783 | k141_23783_17 | 26748 | 29867 | + | 1.B.14.6.1 |
| pfam | k141_23783 | k141_23783_18 | 29936 | 31708 | + | SusD_RagB | SusD-like_3 |
| TC | k141_23783 | k141_23783_19 | 31817 | 33079 | - | 9.B.10.1.1 |
Gene ID: k141_23783_6
Type: CAZyme
Location: 3847 - 6474 (+)
Type: CAZyme
Location: 3847 - 6474 (+)
Gene ID: k141_23783_7
Type: peptidase
Location: 6655 - 9183 (-)
Type: peptidase
Location: 6655 - 9183 (-)
Gene ID: k141_23783_8
Type: pfam
Location: 9224 - 10951 (-)
Type: pfam
Location: 9224 - 10951 (-)
Gene ID: k141_23783_9
Type: TC
Location: 10964 - 14191 (-)
Type: TC
Location: 10964 - 14191 (-)
Gene ID: k141_23783_10
Type: STP
Location: 14297 - 15247 (-)
Type: STP
Location: 14297 - 15247 (-)
Gene ID: k141_23783_11
Type: STP
Location: 15303 - 15905 (-)
Type: STP
Location: 15303 - 15905 (-)
Gene ID: k141_23783_12
Type: CAZyme
Location: 15921 - 18506 (-)
Type: CAZyme
Location: 15921 - 18506 (-)
Gene ID: k141_23783_13
Type: STP
Location: 19510 - 20388 (-)
Type: STP
Location: 19510 - 20388 (-)
Gene ID: k141_23783_14
Type: TC
Location: 20488 - 21675 (-)
Type: TC
Location: 20488 - 21675 (-)
Gene ID: k141_23783_15
Type: CAZyme
Location: 21690 - 23519 (-)
Type: CAZyme
Location: 21690 - 23519 (-)
Gene ID: k141_23783_16
Type: TF
Location: 23826 - 26573 (+)
Type: TF
Location: 23826 - 26573 (+)
Gene ID: k141_23783_17
Type: TC
Location: 26748 - 29867 (+)
Type: TC
Location: 26748 - 29867 (+)
Gene ID: k141_23783_18
Type: pfam
Location: 29936 - 31708 (+)
Type: pfam
Location: 29936 - 31708 (+)
Gene ID: k141_23783_19
Type: TC
Location: 31817 - 33079 (-)
Type: TC
Location: 31817 - 33079 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella muris_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.