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Cluster: CGMR064832_CGC93

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_33560 k141_33560_1 36 1361 + 3.A.2.3.3
pfam k141_33560 k141_33560_2 1405 2010 + ATP-synt_D
TC k141_33560 k141_33560_3 2007 3824 + 3.A.2.2.2
TC k141_33560 k141_33560_4 3880 4341 + 3.A.2.2.2
CAZyme k141_33560 k141_33560_5 4547 6208 + GT3
CAZyme k141_33560 k141_33560_6 6246 8810 + GT35
pfam k141_33560 k141_33560_7 8951 10051 - Thioredoxin | AhpC-TSA | Redoxin | Thioredoxin_2 | Thioredoxin_8 | DUF4369
TC k141_33560 k141_33560_8 10196 11581 + 3.A.1.11.8
TC k141_33560 k141_33560_9 11593 12393 + 3.A.1.11.8
TC k141_33560 k141_33560_10 12387 13181 + 3.A.1.11.8
Gene ID: k141_33560_1
Type: TC
Location: 36 - 1361 (+)
Gene ID: k141_33560_2
Type: pfam
Location: 1405 - 2010 (+)
Gene ID: k141_33560_3
Type: TC
Location: 2007 - 3824 (+)
Gene ID: k141_33560_4
Type: TC
Location: 3880 - 4341 (+)
Gene ID: k141_33560_5
Type: CAZyme
Location: 4547 - 6208 (+)
Gene ID: k141_33560_6
Type: CAZyme
Location: 6246 - 8810 (+)
Gene ID: k141_33560_7
Type: pfam
Location: 8951 - 10051 (-)
Gene ID: k141_33560_8
Type: TC
Location: 10196 - 11581 (+)
Gene ID: k141_33560_9
Type: TC
Location: 11593 - 12393 (+)
Gene ID: k141_33560_10
Type: TC
Location: 12387 - 13181 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_33560_8 vegan > omnivore 1.16164 0.00085

🧭 Explore Read Mapping of CGC

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