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Cluster: CGMR064832_CGC85

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_102537 k141_102537_2 4756 7884 + 1.B.14.6.1
pfam k141_102537 k141_102537_3 7903 9831 + SusD_RagB | SusD-like_3
TC k141_102537 k141_102537_4 9864 12878 + 1.B.14.6.2
pfam k141_102537 k141_102537_5 12908 14545 + SusD_RagB | SusD-like_3
CAZyme k141_102537 k141_102537_6 14574 15467 + CBM32
CAZyme k141_102537 k141_102537_7 15486 16961 + GH16_3
CAZyme k141_102537 k141_102537_8 16993 18897 + GH16_3 | GH43_24
CAZyme k141_102537 k141_102537_9 19022 20278 + GH154
CAZyme k141_102537 k141_102537_10 20307 21329 + GH43_24
CAZyme k141_102537 k141_102537_11 21344 22639 + PL42
CAZyme k141_102537 k141_102537_12 22644 23777 + GH105
pfam k141_102537 k141_102537_13 23786 24802 - Acetyltransf_1 | Acetyltransf_9
pfam k141_102537 k141_102537_14 24820 25737 - LPG_synthase_C
TC k141_102537 k141_102537_15 25792 26487 - 2.A.122.1.1
TC k141_102537 k141_102537_16 26484 26927 - 1.E.14.1.13
pfam k141_102537 k141_102537_17 27126 28145 + PTA_PTB
pfam k141_102537 k141_102537_18 28192 29391 + Acetate_kinase
CAZyme k141_102537 k141_102537_19 29529 30518 + GT2
CAZyme k141_102537 k141_102537_20 30684 32681 - GH20
pfam k141_102537 k141_102537_21 32828 33523 + RadC | UPF0758_N
TF k141_102537 k141_102537_22 33538 37470 - HTH_AraC
TC k141_102537 k141_102537_23 37835 41140 + 1.B.14.6.1
Gene ID: k141_102537_2
Type: TC
Location: 4756 - 7884 (+)
Gene ID: k141_102537_3
Type: pfam
Location: 7903 - 9831 (+)
Gene ID: k141_102537_4
Type: TC
Location: 9864 - 12878 (+)
Gene ID: k141_102537_5
Type: pfam
Location: 12908 - 14545 (+)
Gene ID: k141_102537_6
Type: CAZyme
Location: 14574 - 15467 (+)
Gene ID: k141_102537_7
Type: CAZyme
Location: 15486 - 16961 (+)
Gene ID: k141_102537_8
Type: CAZyme
Location: 16993 - 18897 (+)
Gene ID: k141_102537_9
Type: CAZyme
Location: 19022 - 20278 (+)
Gene ID: k141_102537_10
Type: CAZyme
Location: 20307 - 21329 (+)
Gene ID: k141_102537_11
Type: CAZyme
Location: 21344 - 22639 (+)
Gene ID: k141_102537_12
Type: CAZyme
Location: 22644 - 23777 (+)
Gene ID: k141_102537_13
Type: pfam
Location: 23786 - 24802 (-)
Gene ID: k141_102537_14
Type: pfam
Location: 24820 - 25737 (-)
Gene ID: k141_102537_15
Type: TC
Location: 25792 - 26487 (-)
Gene ID: k141_102537_16
Type: TC
Location: 26484 - 26927 (-)
Gene ID: k141_102537_17
Type: pfam
Location: 27126 - 28145 (+)
Gene ID: k141_102537_18
Type: pfam
Location: 28192 - 29391 (+)
Gene ID: k141_102537_19
Type: CAZyme
Location: 29529 - 30518 (+)
Gene ID: k141_102537_20
Type: CAZyme
Location: 30684 - 32681 (-)
Gene ID: k141_102537_21
Type: pfam
Location: 32828 - 33523 (+)
Gene ID: k141_102537_22
Type: TF
Location: 33538 - 37470 (-)
Gene ID: k141_102537_23
Type: TC
Location: 37835 - 41140 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_102537_2 vegan > omnivore 1.20547 0.00085
k141_102537_3 vegan > omnivore 1.52396 0.00085
k141_102537_4 vegan > omnivore 1.59164 0.00085
k141_102537_5 vegan > omnivore 1.44412 0.00085
k141_102537_6 vegan > omnivore 1.31697 0.00085
k141_102537_11 vegan > omnivore 1.01892 0.00000

🧭 Explore Read Mapping of CGC

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