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Cluster: CGMR064832_CGC69

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_77795 k141_77795_4 1589 2767 - PL13
pfam k141_77795 k141_77795_5 2891 3442 - DUF4738
TF k141_77795 k141_77795_6 3557 7078 + HTH_AraC
CAZyme k141_77795 k141_77795_7 7194 9803 + GH147
TC k141_77795 k141_77795_8 10109 13084 + 1.B.14.6.1
TC k141_77795 k141_77795_9 13108 14691 + 8.A.46.1.1
pfam k141_77795 k141_77795_10 14694 16466 + SusE | DUF5111 | DUF5114
CAZyme k141_77795 k141_77795_11 16478 17572 + GH53
CAZyme k141_77795 k141_77795_12 17644 20085 + GH2
pfam k141_77795 k141_77795_13 20229 20915 - TrkA_N | F420_oxidored
TC k141_77795 k141_77795_14 20920 22749 - 2.A.38.4.3
STP k141_77795 k141_77795_15 22884 24254 + PALP
TF k141_77795 k141_77795_16 24389 28450 + HTH_AraC
CAZyme k141_77795 k141_77795_17 29042 31177 + PL12_2
CAZyme k141_77795 k141_77795_18 31193 33454 + GH95
NULL(UNKNOWN) k141_77795 k141_77795_19 33466 33573 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_77795 k141_77795_20 33705 35846 + PL12_2
pfam k141_77795 k141_77795_21 35872 38154 + SGBP_BT4661-like
TC k141_77795 k141_77795_22 38181 41324 + 1.B.14.6.1
TC k141_77795 k141_77795_23 41340 43004 + 8.A.46.1.3
NULL(UNKNOWN) k141_77795 k141_77795_24 43045 43212 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_77795 k141_77795_25 43209 44495 + GH88
CAZyme k141_77795 k141_77795_26 44524 46524 + PL12_2
Gene ID: k141_77795_4
Type: CAZyme
Location: 1589 - 2767 (-)
Gene ID: k141_77795_5
Type: pfam
Location: 2891 - 3442 (-)
Gene ID: k141_77795_6
Type: TF
Location: 3557 - 7078 (+)
Gene ID: k141_77795_7
Type: CAZyme
Location: 7194 - 9803 (+)
Gene ID: k141_77795_8
Type: TC
Location: 10109 - 13084 (+)
Gene ID: k141_77795_9
Type: TC
Location: 13108 - 14691 (+)
Gene ID: k141_77795_10
Type: pfam
Location: 14694 - 16466 (+)
Gene ID: k141_77795_11
Type: CAZyme
Location: 16478 - 17572 (+)
Gene ID: k141_77795_12
Type: CAZyme
Location: 17644 - 20085 (+)
Gene ID: k141_77795_13
Type: pfam
Location: 20229 - 20915 (-)
Gene ID: k141_77795_14
Type: TC
Location: 20920 - 22749 (-)
Gene ID: k141_77795_15
Type: STP
Location: 22884 - 24254 (+)
Gene ID: k141_77795_16
Type: TF
Location: 24389 - 28450 (+)
Gene ID: k141_77795_17
Type: CAZyme
Location: 29042 - 31177 (+)
Gene ID: k141_77795_18
Type: CAZyme
Location: 31193 - 33454 (+)
Gene ID: k141_77795_19
Type:
Location: 33466 - 33573 (+)
Gene ID: k141_77795_20
Type: CAZyme
Location: 33705 - 35846 (+)
Gene ID: k141_77795_21
Type: pfam
Location: 35872 - 38154 (+)
Gene ID: k141_77795_22
Type: TC
Location: 38181 - 41324 (+)
Gene ID: k141_77795_23
Type: TC
Location: 41340 - 43004 (+)
Gene ID: k141_77795_24
Type:
Location: 43045 - 43212 (+)
Gene ID: k141_77795_25
Type: CAZyme
Location: 43209 - 44495 (+)
Gene ID: k141_77795_26
Type: CAZyme
Location: 44524 - 46524 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_77795_8 vegetarian > omnivore 1.03728 0.01938
k141_77795_10 vegan > omnivore 1.29699 0.00085

🧭 Explore Read Mapping of CGC

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