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Cluster: CGMR064832_CGC53

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_27244 k141_27244_36 36783 37751 - GH43_29
CAZyme k141_27244 k141_27244_37 37748 39730 - GH51_2
CAZyme k141_27244 k141_27244_38 39757 41277 - GH43_4
TF k141_27244 k141_27244_39 41454 45725 + HTH_AraC
TC k141_27244 k141_27244_40 45908 49132 + 1.B.14.6.1
pfam k141_27244 k141_27244_41 49172 50923 + SusD_RagB | SusD-like_3
pfam k141_27244 k141_27244_42 50956 52740 + Big_3
CAZyme k141_27244 k141_27244_43 52775 54703 + GH43_4
sulfatase k141_27244 k141_27244_44 54874 56013 + S1_22
TC k141_27244 k141_27244_45 56039 57733 + 2.A.21.3.19
Gene ID: k141_27244_36
Type: CAZyme
Location: 36783 - 37751 (-)
Gene ID: k141_27244_37
Type: CAZyme
Location: 37748 - 39730 (-)
Gene ID: k141_27244_38
Type: CAZyme
Location: 39757 - 41277 (-)
Gene ID: k141_27244_39
Type: TF
Location: 41454 - 45725 (+)
Gene ID: k141_27244_40
Type: TC
Location: 45908 - 49132 (+)
Gene ID: k141_27244_41
Type: pfam
Location: 49172 - 50923 (+)
Gene ID: k141_27244_42
Type: pfam
Location: 50956 - 52740 (+)
Gene ID: k141_27244_43
Type: CAZyme
Location: 52775 - 54703 (+)
Gene ID: k141_27244_44
Type: sulfatase
Location: 54874 - 56013 (+)
Gene ID: k141_27244_45
Type: TC
Location: 56039 - 57733 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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